4XJJ

Extracellular domain of type II Transforming Growth Factor Beta receptor in complex with 2-(2-Hydroxyethyl)NDSB-201

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d4xjja1	Small proteins	Snake toxin-like	Snake toxin-like	Extracellular domain of cell surface receptors	TGF-beta type II receptor extracellular domain	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d4xjja2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Snake toxin-like	8038457	3000545	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ecTbetaR2	e4xjjA1	A: few secondary structure elements	X: Snake toxin-like (From Topology)	H: Snake toxin-like (From Topology)	T: Snake toxin-like	F: ecTbetaR2	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.10.60.10	Mainly Beta	Ribbon	CD59	CD59	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF08917	Transforming growth factor beta receptor 2 ectodomain (ecTbetaR2)	Transforming growth factor beta receptor 2 ectodomain	The Transforming growth factor beta receptor 2 ectodomain is a compact fold consisting of nine beta-strands and a single helix stabilised by a network of six intra strand disulphide bonds. The folding topology includes a central five-stranded antipar ...	The Transforming growth factor beta receptor 2 ectodomain is a compact fold consisting of nine beta-strands and a single helix stabilised by a network of six intra strand disulphide bonds. The folding topology includes a central five-stranded antiparallel beta-sheet, eight-residues long at its centre, covered by a second layer consisting of two segments of two-stranded antiparallel beta-sheets (beta1-beta4, beta3-beta9) [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	TGF-beta receptor type-2	protein serine/threonine kinase activity molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups transmembrane receptor protein serine/threonine kinase activity transforming growth factor beta receptor activity, type II transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity protein serine/threonine kinase activity molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups transmembrane receptor protein serine/threonine kinase activity transforming growth factor beta receptor activity, type II transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity transforming growth factor beta receptor activity transforming growth factor beta receptor binding protein binding binding signaling receptor binding type I transforming growth factor beta receptor binding cytokine receptor binding protein-containing complex binding activin binding enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity kinase regulator activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding activin receptor activity molecular adaptor activity cation binding metal ion binding transforming growth factor beta binding growth factor binding cytokine binding type III transforming growth factor beta receptor binding SMAD binding glycosaminoglycan binding	cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction enzyme-linked receptor protein signaling pathway positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway biological regulation positive regulation of intracellular signal transduction positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway SMAD protein signal transduction regulation of response to stimulus regulation of cell communication cellular process regulation of SMAD protein signal transduction positive regulation of SMAD protein signal transduction positive regulation of signaling response to chemical response to xenobiotic stimulus developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development heart development circulatory system development cardiac chamber morphogenesis heart morphogenesis ventricular septum development anatomical structure morphogenesis cardiac septum development cardiac septum morphogenesis ventricular septum morphogenesis cardiac chamber development animal organ morphogenesis cardiac ventricle development regulation of developmental process cellular developmental process regulation of cell differentiation stem cell differentiation cell differentiation regulation of stem cell differentiation sensory organ development eye development visual system development camera-type eye development sensory system development lens development in camera-type eye regulation of biosynthetic process cellular biosynthetic process cellular metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process apoptotic process cell death programmed cell death response to sterol response to lipid response to alcohol response to oxygen-containing compound response to cholesterol response to organic cyclic compound membranous septum morphogenesis bronchus development tube development respiratory tube development tube morphogenesis respiratory system development bronchus morphogenesis epithelial cell apoptotic process lens fiber cell apoptotic process blood vessel morphogenesis artery development vasculature development artery morphogenesis blood vessel development positive regulation of phosphorylation regulation of catalytic activity regulation of transferase activity positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process phosphorus metabolic process protein modification process positive regulation of protein phosphorylation protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process primary metabolic process regulation of molecular function positive regulation of kinase activity regulation of kinase activity activation of protein kinase activity macromolecule modification regulation of phosphorus metabolic process regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of cellular metabolic process positive regulation of molecular function positive regulation of protein modification process protein metabolic process positive regulation of protein kinase activity positive regulation of transferase activity positive regulation of catalytic activity regulation of protein kinase activity regulation of phosphorylation embryo development ending in birth or egg hatching chordate embryonic development embryo development in utero embryonic development outflow tract septum morphogenesis outflow tract morphogenesis hemopoiesis cell development embryonic hemopoiesis embryonic organ development branching morphogenesis of an epithelial tube angiogenesis epithelial tube morphogenesis epithelium development morphogenesis of an epithelium tissue development branching involved in blood vessel morphogenesis tissue morphogenesis morphogenesis of a branching structure anatomical structure formation involved in morphogenesis morphogenesis of a branching epithelium secondary palate development roof of mouth development mesenchyme development mesenchymal cell differentiation epithelial to mesenchymal transition positive regulation of cell population proliferation regulation of leukocyte activation regulation of alpha-beta T cell activation positive regulation of alpha-beta T cell proliferation regulation of cell activation positive regulation of CD4-positive, alpha-beta T cell proliferation positive regulation of cell activation T cell activation alpha-beta T cell proliferation lymphocyte proliferation positive regulation of leukocyte activation alpha-beta T cell activation regulation of immune system process positive regulation of immune system process regulation of leukocyte proliferation cell population proliferation positive regulation of T cell activation regulation of CD4-positive, alpha-beta T cell proliferation positive regulation of lymphocyte proliferation positive regulation of T cell proliferation positive regulation of alpha-beta T cell activation regulation of cell population proliferation mononuclear cell proliferation regulation of leukocyte cell-cell adhesion positive regulation of leukocyte proliferation positive regulation of multicellular organismal process positive regulation of leukocyte cell-cell adhesion lymphocyte activation leukocyte proliferation leukocyte cell-cell adhesion leukocyte activation positive regulation of cell-cell adhesion regulation of alpha-beta T cell proliferation positive regulation of lymphocyte activation positive regulation of CD4-positive, alpha-beta T cell activation cell adhesion cell-cell adhesion CD4-positive, alpha-beta T cell activation positive regulation of mononuclear cell proliferation regulation of multicellular organismal process regulation of cell-cell adhesion T cell proliferation regulation of lymphocyte proliferation CD4-positive, alpha-beta T cell proliferation positive regulation of cell adhesion regulation of cell adhesion cell activation regulation of T cell activation regulation of T cell proliferation regulation of CD4-positive, alpha-beta T cell activation immune system process regulation of mononuclear cell proliferation regulation of lymphocyte activation immune system development regulation of B cell tolerance induction B cell tolerance induction positive regulation of B cell tolerance induction regulation of tolerance induction positive regulation of tolerance induction tolerance induction mesenchyme morphogenesis endocardial cushion morphogenesis endocardial cushion development inferior endocardial cushion morphogenesis Notch signaling pathway pattern specification process embryonic heart tube development embryonic heart tube morphogenesis heart looping determination of bilateral symmetry determination of left/right symmetry specification of symmetry embryonic organ morphogenesis embryonic morphogenesis determination of heart left/right asymmetry regionalization left/right pattern formation cellular response to growth factor stimulus cellular response to transforming growth factor beta stimulus response to endogenous stimulus cellular response to endogenous stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway response to growth factor transforming growth factor beta receptor superfamily signaling pathway cell-cell adhesion via plasma-membrane adhesion molecules endocardial cushion fusion cell adhesion involved in heart morphogenesis smoothened signaling pathway myeloid leukocyte differentiation myeloid dendritic cell activation mononuclear cell differentiation myeloid leukocyte activation myeloid cell differentiation myeloid dendritic cell differentiation dendritic cell differentiation leukocyte differentiation lung lobe morphogenesis lung lobe development lung development lung morphogenesis aorta morphogenesis aorta development regulation of epithelial to mesenchymal transition positive regulation of epithelial to mesenchymal transition positive regulation of developmental process positive regulation of cell differentiation embryonic cranial skeleton morphogenesis skeletal system development cranial skeletal system development embryonic skeletal system development skeletal system morphogenesis embryonic skeletal system morphogenesis gastrulation positive regulation of mesenchymal cell proliferation regulation of mesenchymal cell proliferation mesenchymal cell proliferation atrioventricular valve development heart valve development tricuspid valve development heart valve morphogenesis tricuspid valve morphogenesis atrioventricular valve morphogenesis trachea morphogenesis trachea formation trachea development animal organ formation T cell tolerance induction positive regulation of T cell tolerance induction regulation of T cell tolerance induction reactive oxygen species metabolic process positive regulation of reactive oxygen species metabolic process regulation of reactive oxygen species metabolic process regulation of tolerance induction to self antigen tolerance induction to self antigen positive regulation of tolerance induction to self antigen aortic valve development semi-lunar valve development aortic valve morphogenesis connective tissue development developmental growth endochondral bone morphogenesis organ growth cell growth growth plate cartilage chondrocyte development chondrocyte differentiation involved in endochondral bone morphogenesis growth plate cartilage development endochondral bone growth growth plate cartilage chondrocyte growth bone development developmental cell growth chondrocyte hypertrophy growth chondrocyte development involved in endochondral bone morphogenesis developmental growth involved in morphogenesis growth plate cartilage chondrocyte differentiation bone growth chondrocyte differentiation cartilage development involved in endochondral bone morphogenesis bone morphogenesis chondrocyte development cartilage development regulation of stem cell proliferation stem cell proliferation cardiac ventricle morphogenesis cardiac left ventricle morphogenesis gland morphogenesis mammary gland morphogenesis mammary gland development gland development positive regulation of cardiac epithelial to mesenchymal transition positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formation cardiac epithelial to mesenchymal transition epithelial to mesenchymal transition involved in endocardial cushion formation regulation of cardiac epithelial to mesenchymal transition endocardial cushion formation regulation of epithelial to mesenchymal transition involved in endocardial cushion formation RNA transport nitrogen compound transport transport nucleic acid transport establishment of localization localization establishment of RNA localization miRNA transport macromolecule localization RNA localization nucleobase-containing compound transport Langerhans cell differentiation vasculogenesis regulation of vasculature development regulation of anatomical structure morphogenesis regulation of multicellular organismal development positive regulation of angiogenesis positive regulation of vasculature development regulation of angiogenesis regulation of leukocyte differentiation lymphocyte differentiation positive regulation of T cell differentiation regulation of cell development T cell differentiation positive regulation of cell development positive regulation of alpha-beta T cell differentiation positive regulation of NK T cell differentiation regulation of alpha-beta T cell differentiation regulation of T cell differentiation alpha-beta T cell differentiation positive regulation of hemopoiesis NK T cell differentiation regulation of lymphocyte differentiation regulation of hemopoiesis positive regulation of leukocyte differentiation regulation of NK T cell differentiation positive regulation of lymphocyte differentiation positive regulation of locomotion regulation of cell motility positive regulation of cell migration positive regulation of epithelial cell migration tissue migration ameboidal-type cell migration positive regulation of cell motility regulation of cell migration cell migration epithelial cell migration cell motility regulation of epithelial cell migration locomotion epithelium migration regulation of locomotion	cell periphery cell surface membrane plasma membrane cellular anatomical entity external side of plasma membrane side of membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex receptor complex extracellular region extracellular space cell periphery cell surface membrane plasma membrane cellular anatomical entity external side of plasma membrane side of membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex receptor complex extracellular region extracellular space membrane microdomain membrane raft plasma membrane raft plasma membrane region caveola catalytic complex plasma membrane protein complex membrane protein complex transferase complex protein kinase complex transferase complex, transferring phosphorus-containing groups serine/threonine protein kinase complex transforming growth factor beta ligand-receptor complex plasma membrane signaling receptor complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR000719	Protein kinase domain	Domain
A	IPR000333	Ser/Thr protein kinase, TGFB receptor	Family
A	IPR017194	Transforming growth factor-beta receptor, type II	Family
A	IPR017441	Protein kinase, ATP binding site	Binding Site
A	IPR045860	Snake toxin-like superfamily	Homologous Superfamily
A	IPR015013	Transforming growth factor beta receptor 2 ectodomain	Domain
A	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P37173	Loeys-Dietz syndrome thoracic aortic aneurysm Lynch syndrome aortic aneurysm Marfan syndrome colorectal cancer, hereditary nonpolyposis, type 6 Loeys-Dietz syndrome 2 esophageal cancer Aneurysm, Dissecting gastrointestinal stromal tumor bone disease sarcomatoid carcinoma carcinoma craniosynostosis malignant colon neoplasm Loeys-Dietz syndrome thoracic aortic aneurysm Lynch syndrome aortic aneurysm Marfan syndrome colorectal cancer, hereditary nonpolyposis, type 6 Loeys-Dietz syndrome 2 esophageal cancer Aneurysm, Dissecting gastrointestinal stromal tumor bone disease sarcomatoid carcinoma carcinoma craniosynostosis malignant colon neoplasm breast carcinoma prostate cancer familial thoracic aortic aneurysm and aortic dissection malignant ependymoma cancer ulcerative colitis chronic obstructive pulmonary disease medulloblastoma colorectal cancer dermatomyositis invasive ductal breast carcinoma arthrogryposis nephrosclerosis limb-girdle muscular dystrophy osteosarcoma ductal breast carcinoma in situ pilocytic astrocytoma lung benign neoplasm brain cancer esophagus carcinoma in situ breast cancer malignant glioma gastric adenocarcinoma cerebrovascular disorder undifferentiated carcinoma Gaucher disease colon carcinoma neoplasm of esophagus diabetic kidney disease juvenile dermatomyositis Becker muscular dystrophy benign neoplasm of esophagus ovarian cancer Ehlers-Danlos syndrome bone fracture lung cancer lymphoplasmacytic lymphoma schizophrenia malignant mesothelioma carcinoma of esophagus MALT lymphoma glioblastoma colonic neoplasm migraine disorder adrenal cortex carcinoma myopathy cystic fibrosis intellectual disability benign colon neoplasm non-small cell lung carcinoma Duchenne muscular dystrophy bone cancer pancreatic ductal adenocarcinoma Emery-Dreifuss muscular dystrophy lung adenocarcinoma esophageal squamous cell carcinoma lung carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.