4WBZ
tRNA-processing enzyme (apo form 2)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Poly A polymerase C-terminal region-like | 8041327 | 3001334 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nucleotidyltransferase-like | 8041329 | 3000129 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Poly A polymerase C-terminal region-like | 8041327 | 3001334 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Nucleotidyltransferase-like | 8041329 | 3000129 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PolyA_pol_RNAbd | e4wbzA2 | A: alpha complex topology | X: PDEase-like | H: Poly A polymerase C-terminal region-like (From Topology) | T: Poly A polymerase C-terminal region-like | F: PolyA_pol_RNAbd | ECOD (1.6) |
A | PolyA_pol | e4wbzA1 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PolyA_pol | ECOD (1.6) |
B | PolyA_pol_RNAbd | e4wbzB1 | A: alpha complex topology | X: PDEase-like | H: Poly A polymerase C-terminal region-like (From Topology) | T: Poly A polymerase C-terminal region-like | F: PolyA_pol_RNAbd | ECOD (1.6) |
B | PolyA_pol | e4wbzB2 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PolyA_pol | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
A | 1.10.3090.10 | Mainly Alpha | Orthogonal Bundle | cca-adding enzyme, domain 2 | cca-adding enzyme, domain 2 | CATH (4.3.0) |
B | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
B | 1.10.3090.10 | Mainly Alpha | Orthogonal Bundle | cca-adding enzyme, domain 2 | cca-adding enzyme, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01743 | Poly A polymerase head domain (PolyA_pol) | Poly A polymerase head domain | This family includes nucleic acid independent RNA polymerases, such as Poly(A) polymerase, which adds the poly (A) tail to mRNA EC:2.7.7.19. This family also includes the tRNA nucleotidyltransferase that adds the CCA to the 3' of the tRNA EC:2.7.7.25 ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046342 | CBS domain superfamily | Homologous Superfamily | |
IPR003156 | DHHA1 domain | Domain | |
IPR043519 | Nucleotidyltransferase superfamily | Homologous Superfamily | |
IPR000644 | CBS domain | Domain | |
IPR002646 | Poly A polymerase, head domain | Domain | |
IPR038763 | DHH phosphoesterase superfamily | Homologous Superfamily | |
IPR052390 | tRNA Nucleotidyltransferase/Poly(A) Polymerase | Family |