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 4V4S | pdb_00004v4s

Crystal structure of the whole ribosomal complex.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth AF]Ribosomal_L32pe4v4sAF1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
H [auth AE]Ribosomal_L32pe4v4sAE1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
G [auth AD]FlaF_Ig-likee4v4sAD1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (v295.2)
F [auth AC]Ribosomal_L32pe4v4sAC1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
DB [auth BK]Ribosomal_L32pe4v4sBK1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
CB [auth B9]Ribosomal_L32pe4v4sB91 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
BB [auth B8]Ribosomal_L32pe4v4sB81 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
AB [auth B7]Ribosomal_L32pe4v4sB71 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
ZA [auth B6]PemK_toxine4v4sB61 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: profilin-likeT: C-terminal domain in DHH phosphoesterasesF: PemK_toxinECOD (v295.2)
YA [auth B5]Ribosomal_L32pe4v4sB51 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
XA [auth B4]Ribosomal_L32pe4v4sB41 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
E [auth AB]FlaF_Ig-likee4v4sAB1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (v295.2)
WA [auth B0]Ribosomal_L32pe4v4sB01 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
VA [auth B3]Ribosomal_L32pe4v4sB31 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
UA [auth B2]Ribosomal_L32pe4v4sB21 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
TA [auth BV]Ribosomal_L32pe4v4sBV1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
SA [auth BU]Ribosomal_L32pe4v4sBU1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
RA [auth BR]Ribosomal_L32pe4v4sBR1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
QA [auth BZ]Peptidase_M28e4v4sBZ1 A: alpha arraysX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Peptidase_M28ECOD (v295.2)
PA [auth BY]Ribosomal_L32pe4v4sBY1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
OA [auth BX]Ribosomal_L32pe4v4sBX1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
NA [auth BW]Ribosomal_L32pe4v4sBW1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
MA [auth BT]Ribosomal_L32pe4v4sBT1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
LA [auth BS]Ribosomal_L32pe4v4sBS1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
KA [auth BQ]PemK_toxine4v4sBQ1 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: profilin-likeT: C-terminal domain in DHH phosphoesterasesF: PemK_toxinECOD (v295.2)
JA [auth BP]Ribosomal_L32pe4v4sBP1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
IA [auth BO]Ribosomal_L32pe4v4sBO1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
HA [auth BN]Ribosomal_L32pe4v4sBN1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
GA [auth BI]Ribosomal_L32pe4v4sBI1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
FA [auth BH]Ribosomal_L32pe4v4sBH1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
EA [auth BG]Ribosomal_L32pe4v4sBG1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
DA [auth BF]Ribosomal_L32pe4v4sBF1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
CA [auth BE]Ribosomal_L32pe4v4sBE1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
BA [auth BD]Ribosomal_L19e_Ce4v4sBD1 A: alpha arraysX: Ribosomal protein L19 (L19e) C-terminal domainH: Ribosomal protein L19 (L19e) C-terminal domainT: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (v295.2)
Y [auth AY]Ribosomal_L32pe4v4sAY1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
W [auth AT]Ribosomal_L32pe4v4sAT1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
V [auth AS]Cellulasee4v4sAS1 A: alpha arraysX: beta-propeller-likeH: beta-propellerT: Nucleic acid-binding proteinF: CellulaseECOD (v295.2)
U [auth AR]Ribosomal_L32pe4v4sAR1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
T [auth AQ]Ribosomal_S17,Ribosomal_S17_Ne4v4sAQ1 A: alpha arraysX: beta-propeller-likeH: beta-propellerT: Nucleic acid-binding proteinF: Ribosomal_S17,Ribosomal_S17_NECOD (v295.2)
S [auth AP]Ribosomal_L32pe4v4sAP1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
R [auth AO]Ribosomal_L32pe4v4sAO1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
Q [auth AN]Ribosomal_L32pe4v4sAN1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
P [auth AM]Cellulasee4v4sAM1 A: alpha arraysX: beta-propeller-likeH: beta-propellerT: Nucleic acid-binding proteinF: CellulaseECOD (v295.2)
O [auth AL]Ribosomal_L32pe4v4sAL1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
N [auth AK]Ribosomal_L32pe4v4sAK1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
M [auth AJ]Ribosomal_L32pe4v4sAJ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
L [auth AI]FlaF_Ig-likee4v4sAI1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (v295.2)
K [auth AH]Ribosomal_L32pe4v4sAH1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)
J [auth AG]Ribosomal_L32pe4v4sAG1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_L32pECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth AF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
H [auth AE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
H [auth AE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
G [auth AD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
G [auth AD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
F [auth AC]PF07650KH domain (KH_2)KH domainDomain
F [auth AC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
DB [auth BK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
DB [auth BK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
BB [auth B8]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
AB [auth B7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
ZA [auth B6]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
YA [auth B5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
XA [auth B4]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
E [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
WA [auth B0]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
VA [auth B3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
UA [auth B2]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
TA [auth BV]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
SA [auth BU]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
RA [auth BR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
QA [auth BZ]PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
QA [auth BZ]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
PA [auth BY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
PA [auth BY]PF00467KOW motif (KOW)KOW motif- Family
OA [auth BX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
NA [auth BW]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
LA [auth BS]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
JA [auth BP]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
IA [auth BO]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
HA [auth BN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
FA [auth BH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
EA [auth BG]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
EA [auth BG]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
DA [auth BF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BA [auth BD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
BA [auth BD]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
Y [auth AY]PF03462PCRF domain (PCRF)PCRF domainThis domain is found in peptide chain release factors. Domain
Y [auth AY]PF00472RF-1 domain (RF-1)RF-1 domainThis domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domai ...This domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domain contains a highly conserved motif GGQ, where the glutamine is thought to coordinate the water that mediates the hydrolysis.
Domain
V [auth AS]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
U [auth AR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
T [auth AQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
S [auth AP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
R [auth AO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
Q [auth AN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
P [auth AM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
O [auth AL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
N [auth AK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
M [auth AJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
L [auth AI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
K [auth AH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
J [auth AG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AF]30S ribosomal protein S6
H [auth AE]30S ribosomal protein S5
G [auth AD]30S ribosomal protein S4
F [auth AC]30S ribosomal protein S3
DB [auth BK]50S ribosomal protein L11---
CB [auth B9]50S ribosomal protein L36---
BB [auth B8]50S ribosomal protein L35---
AB [auth B7]50S ribosomal protein L34---
ZA [auth B6]50S ribosomal protein L33---
YA [auth B5]50S ribosomal protein L32---
XA [auth B4]50S ribosomal protein L31---
E [auth AB]30S ribosomal protein S2
WA [auth B0]50S ribosomal protein L27---
VA [auth B3]50S ribosomal protein L30
UA [auth B2]50S ribosomal protein L29---
TA [auth BV]50S ribosomal protein L21---
SA [auth BU]50S ribosomal protein L20---
RA [auth BR]50S ribosomal protein L17
QA [auth BZ]50S ribosomal protein CTC---
PA [auth BY]50S ribosomal protein 24---
OA [auth BX]50S ribosomal protein L23---
NA [auth BW]50S ribosomal protein L22
D [auth AX]5'-D(*AP*UP*GP*UP*UP*CP*UP*AP*GP*AP*UP*AP*CP*AP*AP*UP*AP*AP*U)-3'---
MA [auth BT]50S ribosomal protein L19---
LA [auth BS]50S ribosomal protein L18---
KA [auth BQ]50S ribosomal protein L16---
JA [auth BP]50S ribosomal protein L15---
IA [auth BO]50S ribosomal protein L14---
HA [auth BN]50S ribosomal protein L13---
GA [auth BI]50S ribosomal protein L9---
FA [auth BH]50S ribosomal protein L6---
EA [auth BG]50S ribosomal protein L5---
DA [auth BF]50S ribosomal protein L4---
C [auth AW]E-site tRNA (Phe)---
CA [auth BE]50S ribosomal protein L3---
BA [auth BD]50S ribosomal protein L2---
AA [auth BA]23S ribosomal RNA---
Z [auth BB]5S ribosomal RNA---
Y [auth AY]Peptide chain release factor 2 -
X [auth AU]30S ribosomal protein Thx- -
W [auth AT]30S ribosomal protein S20
V [auth AS]30S ribosomal protein S19
U [auth AR]30S ribosomal protein S18
T [auth AQ]30S ribosomal protein S17
B [auth AV]P-site tRNA (Phe)---
S [auth AP]30S ribosomal protein S16
R [auth AO]30S ribosomal protein S15
Q [auth AN]30S ribosomal protein S14
P [auth AM]30S ribosomal protein S13
O [auth AL]30S ribosomal protein S12---
N [auth AK]30S ribosomal protein S11
M [auth AJ]30S ribosomal protein S10
L [auth AI]30S ribosomal protein S9
K [auth AH]30S ribosomal protein S8
J [auth AG]30S ribosomal protein S7
A [auth AA]16S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AF]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
I [auth AF]IPR000529Small ribosomal subunit protein bS6Family
I [auth AF]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
I [auth AF]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
I [auth AF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
H [auth AE]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
H [auth AE]IPR000851Small ribosomal subunit protein uS5Family
H [auth AE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
H [auth AE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
H [auth AE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth AE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
H [auth AE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
G [auth AD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
G [auth AD]IPR002942RNA-binding S4 domainDomain
G [auth AD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
G [auth AD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
G [auth AD]IPR022801Small ribosomal subunit protein uS4Family
G [auth AD]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
F [auth AC]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
F [auth AC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
F [auth AC]IPR057258Small ribosomal subunit protein uS3Family
F [auth AC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
F [auth AC]IPR004087K Homology domainDomain
F [auth AC]IPR004044K Homology domain, type 2Domain
F [auth AC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
F [auth AC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
F [auth AC]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
E [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
E [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
E [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
E [auth AB]IPR001865Small ribosomal subunit protein uS2Family
VA [auth B3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
VA [auth B3]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
VA [auth B3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
VA [auth B3]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
RA [auth BR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
RA [auth BR]IPR000456Large ribosomal subunit protein bL17Family
NA [auth BW]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
NA [auth BW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
NA [auth BW]IPR001063Large ribosomal subunit protein uL22Family
NA [auth BW]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
NA [auth BW]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
Y [auth AY]IPR004374Peptide chain release factor 2Family
Y [auth AY]IPR000352Peptide chain release factor class IDomain
Y [auth AY]IPR045853Peptide chain release factor class I superfamilyHomologous Superfamily
Y [auth AY]IPR005139Peptide chain release factorDomain
X [auth AU]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
X [auth AU]IPR031414Small ribosomal subunit protein bTHXFamily
W [auth AT]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
W [auth AT]IPR002583Small ribosomal subunit protein bS20Family
V [auth AS]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
V [auth AS]IPR002222Small ribosomal subunit protein uS19Family
V [auth AS]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
V [auth AS]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
U [auth AR]IPR001648Small ribosomal subunit protein bS18Family
U [auth AR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
U [auth AR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
T [auth AQ]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
T [auth AQ]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
T [auth AQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
T [auth AQ]IPR000266Small ribosomal subunit protein uS17Family
S [auth AP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
S [auth AP]IPR000307Small ribosomal subunit protein bS16Family
R [auth AO]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
R [auth AO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
R [auth AO]IPR000589Small ribosomal subunit protein uS15Family
Q [auth AN]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
Q [auth AN]IPR001209Small ribosomal subunit protein uS14Family
Q [auth AN]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
Q [auth AN]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
P [auth AM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
P [auth AM]IPR001892Small ribosomal subunit protein uS13Family
P [auth AM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
P [auth AM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
P [auth AM]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
N [auth AK]IPR001971Small ribosomal subunit protein uS11Family
N [auth AK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
N [auth AK]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
N [auth AK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth AJ]IPR001848Small ribosomal subunit protein uS10Family
M [auth AJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
M [auth AJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
M [auth AJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
L [auth AI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
L [auth AI]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
L [auth AI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
L [auth AI]IPR000754Small ribosomal subunit protein uS9Family
L [auth AI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
K [auth AH]IPR000630Small ribosomal subunit protein uS8Family
K [auth AH]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
K [auth AH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
J [auth AG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
J [auth AG]IPR000235Small ribosomal subunit protein uS7Family
J [auth AG]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
J [auth AG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
J [auth AG]IPR023798Small ribosomal subunit protein uS7 domainDomain