4UDQ
Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the reduced state
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GMC_oxred_C | e4udqA1 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C (From Topology) | T: FAD-linked reductases-C | F: GMC_oxred_C | ECOD (1.6) |
A | GMC_oxred_N | e4udqA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: GMC_oxred_N | ECOD (1.6) |
B | GMC_oxred_C | e4udqB2 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C (From Topology) | T: FAD-linked reductases-C | F: GMC_oxred_C | ECOD (1.6) |
B | GMC_oxred_N | e4udqB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: GMC_oxred_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.50.50.60 | Alpha Beta | 3-Layer(bba) Sandwich | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | CATH (4.3.0) |
A | 3.30.410.40 | Alpha Beta | 2-Layer Sandwich | Cholesterol Oxidase | domain 2 | CATH (4.3.0) |
B | 3.50.50.60 | Alpha Beta | 3-Layer(bba) Sandwich | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | CATH (4.3.0) |
B | 3.30.410.40 | Alpha Beta | 2-Layer Sandwich | Cholesterol Oxidase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00732 | GMC oxidoreductase (GMC_oxred_N) | GMC oxidoreductase | This family of proteins bind FAD as a cofactor. | Domain | |
PF05199 | GMC oxidoreductase (GMC_oxred_C) | GMC oxidoreductase | This domain found associated with Pfam:PF00732. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal | Domain | |
IPR012132 | Glucose-methanol-choline oxidoreductase | Family | |
IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal | Domain | |
IPR036188 | FAD/NAD(P)-binding domain superfamily | Homologous Superfamily |