4U8U
The Crystallographic structure of the giant hemoglobin from Glossoscolex paulistus at 3.2 A resolution.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Globins | 8066412 | 4000551 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Globin-like | 8066413 | 3000554 | SCOP2 (2022-06-29) |
E | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
EA [auth e] | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
IA [auth i] | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
MA [auth m] | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
X | SCOP2B Superfamily | Globin-like | 8066413 | 3000554 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Globins | 8066410 | 4000551 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Globin-like | 8066411 | 3000554 | SCOP2 (2022-06-29) |
GA [auth g] | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
KA [auth k] | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
OA [auth o] | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
Z | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Globin-like | 8066411 | 3000554 | SCOP2B (2022-06-29) |
AA [auth a] | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Globins | 8066392 | 4000551 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Globin-like | 8066393 | 3000554 | SCOP2 (2022-06-29) |
H | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
HA [auth h] | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
LA [auth l] | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
PA [auth p] | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
W | SCOP2B Superfamily | Globin-like | 8066393 | 3000554 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Globins | 8061730 | 4000551 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Globin-like | 8061731 | 3000554 | SCOP2 (2022-06-29) |
F | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
FA [auth f] | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
JA [auth j] | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
NA [auth n] | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
Y | SCOP2B Superfamily | Globin-like | 8061731 | 3000554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Globin | e4u8uA1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
E | Globin | e4u8uE1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
EA [auth e] | Globin | e4u8ue1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
I | Globin | e4u8uI1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
IA [auth i] | Globin | e4u8ui1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
MA [auth m] | Globin | e4u8um1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
P | Globin | e4u8uP1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
T | Globin | e4u8uT1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
X | Globin | e4u8uX1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
C | Globin | e4u8uC1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
GA [auth g] | Globin | e4u8ug1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
K | Globin | e4u8uK1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
KA [auth k] | Globin | e4u8uk1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
OA [auth o] | Globin | e4u8uo1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
R | Globin | e4u8uR1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
V | Globin | e4u8uV1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
Z | Globin | e4u8uZ1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
G | Globin | e4u8uG1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
AA [auth a] | Globin | e4u8ua1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
D | Globin | e4u8uD1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
H | Globin | e4u8uH1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
HA [auth h] | Globin | e4u8uh1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
L | Globin | e4u8uL1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
LA [auth l] | Globin | e4u8ul1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
PA [auth p] | Globin | e4u8up1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
S | Globin | e4u8uS1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
W | Globin | e4u8uW1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
BA [auth b] | Eryth_link_C_1 | e4u8ub3 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C_1 | ECOD (1.6) |
BA [auth b] | Ldl_recept_a | e4u8ub2 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
BA [auth b] | EUF08728 | e4u8ub1 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: EUF08728 | ECOD (1.6) |
M | Eryth_link_C_1 | e4u8uM3 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C_1 | ECOD (1.6) |
M | Ldl_recept_a | e4u8uM1 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
M | EUF08728 | e4u8uM2 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: EUF08728 | ECOD (1.6) |
QA [auth q] | Eryth_link_C_1 | e4u8uq1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C_1 | ECOD (1.6) |
QA [auth q] | Ldl_recept_a | e4u8uq2 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
QA [auth q] | EUF08728 | e4u8uq3 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: EUF08728 | ECOD (1.6) |
CA [auth c] | Eryth_link_C_1 | e4u8uc2 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C_1 | ECOD (1.6) |
CA [auth c] | Ldl_recept_a | e4u8uc1 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
N | Eryth_link_C_1 | e4u8uN2 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C_1 | ECOD (1.6) |
N | Ldl_recept_a | e4u8uN1 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
RA [auth r] | Eryth_link_C_1 | e4u8ur1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C_1 | ECOD (1.6) |
RA [auth r] | Ldl_recept_a | e4u8ur2 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
DA [auth d] | Eryth_link_C | e4u8ud1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C | ECOD (1.6) |
DA [auth d] | Ldl_recept_a | e4u8ud2 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
O | Eryth_link_C | e4u8uO2 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C | ECOD (1.6) |
O | Ldl_recept_a | e4u8uO1 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
SA [auth s] | Eryth_link_C | e4u8us2 | A: beta barrels | X: Lipocalins/Streptavidin | H: Quinohemoprotein amine dehydrogenase A chain, domain 3-like (From Topology) | T: Quinohemoprotein amine dehydrogenase A chain, domain 3-like | F: Eryth_link_C | ECOD (1.6) |
SA [auth s] | Ldl_recept_a | e4u8us1 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
B | Globin | e4u8uB1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
F | Globin | e4u8uF1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
FA [auth f] | Globin | e4u8uf1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
J | Globin | e4u8uJ1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
JA [auth j] | Globin | e4u8uj1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
NA [auth n] | Globin | e4u8un1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
Q | Globin | e4u8uQ1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
U | Globin | e4u8uU1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
Y | Globin | e4u8uY1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00042 | Globin (Globin) | Globin | - | Domain | |
PF16915 | Annelid erythrocruorin linker subunit C-terminus (Eryth_link_C) | Annelid erythrocruorin linker subunit C-terminus | This domain is found in linker subunits of the erythrocruorin respiratory complex in annelid worms [1]. | Domain | |
PF00042 | Globin (Globin) | Globin | - | Domain | |
PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat | |
PF16915 | Annelid erythrocruorin linker subunit C-terminus (Eryth_link_C) | Annelid erythrocruorin linker subunit C-terminus | This domain is found in linker subunits of the erythrocruorin respiratory complex in annelid worms [1]. | Domain | |
PF00042 | Globin (Globin) | Globin | - | Domain | |
PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat | |
BA [auth b], M, QA [auth q] | PF16915 | Annelid erythrocruorin linker subunit C-terminus (Eryth_link_C) | Annelid erythrocruorin linker subunit C-terminus | This domain is found in linker subunits of the erythrocruorin respiratory complex in annelid worms [1]. | Domain |
BA [auth b], M, QA [auth q] | PF00042 | Globin (Globin) | Globin | - | Domain |
CA [auth c], N, RA [auth r] | PF16915 | Annelid erythrocruorin linker subunit C-terminus (Eryth_link_C) | Annelid erythrocruorin linker subunit C-terminus | This domain is found in linker subunits of the erythrocruorin respiratory complex in annelid worms [1]. | Domain |
CA [auth c], N, RA [auth r] | PF00042 | Globin (Globin) | Globin | - | Domain |
CA [auth c], N, RA [auth r] | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
DA [auth d], O, SA [auth s] | PF16915 | Annelid erythrocruorin linker subunit C-terminus (Eryth_link_C) | Annelid erythrocruorin linker subunit C-terminus | This domain is found in linker subunits of the erythrocruorin respiratory complex in annelid worms [1]. | Domain |
DA [auth d], O, SA [auth s] | PF00042 | Globin (Globin) | Globin | - | Domain |
DA [auth d], O, SA [auth s] | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
PF16915 | Annelid erythrocruorin linker subunit C-terminus (Eryth_link_C) | Annelid erythrocruorin linker subunit C-terminus | This domain is found in linker subunits of the erythrocruorin respiratory complex in annelid worms [1]. | Domain | |
PF00042 | Globin (Globin) | Globin | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Globin a chain | - | |||
Globin c Chain | ||||
Globin d Chain | ||||
BA [auth b], M, QA [auth q] | Linker L1 | - | - | |
CA [auth c], N, RA [auth r] | Linker L2 | - | - | |
DA [auth d], O, SA [auth s] | Linker L3 | - | - | |
Globin b Chain |