4TN3
Structure of the BBox-Coiled-coil region of Rhesus Trim5alpha
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Phage_lysozyme_2 | e4tn3A1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Phage_lysozyme_2 | ECOD (1.6) |
A | zf-B_box | e4tn3A2 | A: few secondary structure elements | X: B-box zinc-binding domain-like | H: B-box zinc-binding domain (From Topology) | T: B-box zinc-binding domain | F: zf-B_box | ECOD (1.6) |
B | Phage_lysozyme_2 | e4tn3B2 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Phage_lysozyme_2 | ECOD (1.6) |
B | zf-B_box | e4tn3B1 | A: few secondary structure elements | X: B-box zinc-binding domain-like | H: B-box zinc-binding domain (From Topology) | T: B-box zinc-binding domain | F: zf-B_box | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.160.60 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | Classic Zinc Finger | CATH (utative) |
A | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (utative) | |
B | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00959 | Phage lysozyme (Phage_lysozyme) | Phage lysozyme | This family includes lambda phage lysozyme and E. coli endolysin. | Domain | |
PF00643 | B-box zinc finger (zf-B_box) | B-box zinc finger | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR029000 | Cyclophilin-like domain superfamily | Homologous Superfamily | |
IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain | Domain | |
IPR000315 | B-box-type zinc finger | Domain | |
IPR027370 | Zinc finger, RING-type, eukaryotic | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR001841 | Zinc finger, RING-type | Domain | |
IPR020892 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site | Conserved Site | |
IPR052619 | Bacteriophage lysozyme-like | Family | |
IPR001165 | T4-type lysozyme | Family | |
IPR034690 | Endolysin T4 type | Family | |
IPR002196 | Glycoside hydrolase, family 24 | Family | |
IPR023347 | Lysozyme domain superfamily | Homologous Superfamily | |
IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily |