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Crystal structure of R2 pyocin membrane-piercing spike External Resource: Annotation Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) R SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) Q SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) P SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) O SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) N SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) M SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) L SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) K SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) J SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) I SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) H SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) G SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) F SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) E SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) D SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) C SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) B SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29) A SCOP2B Superfamily Phage fibre proteins 8095955 3000351 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) R SHQ1-like_CS e4s37R1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) Q DUF433 e4s37Q1 A: alpha arrays X: CARF (CRISPR-associated Rossmann fold) domains H: HTH T: winged helix domain F: DUF433 ECOD (v295.2) P DUF433 e4s37P1 A: alpha arrays X: CARF (CRISPR-associated Rossmann fold) domains H: HTH T: winged helix domain F: DUF433 ECOD (v295.2) O SHQ1-like_CS e4s37O1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) N DUF433 e4s37N1 A: alpha arrays X: CARF (CRISPR-associated Rossmann fold) domains H: HTH T: winged helix domain F: DUF433 ECOD (v295.2) M DUF433 e4s37M1 A: alpha arrays X: CARF (CRISPR-associated Rossmann fold) domains H: HTH T: winged helix domain F: DUF433 ECOD (v295.2) L SHQ1-like_CS e4s37L1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) K Fusion_gly e4s37K1 A: alpha arrays X: dsRBD-like H: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein T: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein F: Fusion_gly ECOD (v295.2) J SHQ1-like_CS e4s37J1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) I SHQ1-like_CS e4s37I1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) H DUF433 e4s37H1 A: alpha arrays X: CARF (CRISPR-associated Rossmann fold) domains H: HTH T: winged helix domain F: DUF433 ECOD (v295.2) G Ribosomal_S2 e4s37G1 A: alpha arrays X: TIM beta/alpha-barrel H: omega toxin-related T: omega toxin-related F: Ribosomal_S2 ECOD (v295.2) F DUF433 e4s37F1 A: alpha arrays X: CARF (CRISPR-associated Rossmann fold) domains H: HTH T: winged helix domain F: DUF433 ECOD (v295.2) E SHQ1-like_CS e4s37E1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) D DUF433 e4s37D1 A: alpha arrays X: CARF (CRISPR-associated Rossmann fold) domains H: HTH T: winged helix domain F: DUF433 ECOD (v295.2) C SHQ1-like_CS e4s37C1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) B SHQ1-like_CS e4s37B1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2) A SHQ1-like_CS e4s37A1 A: alpha arrays X: Lipocalins/Streptavidin H: Enterocin 7A and 7B T: Enterocin 7A and 7B F: SHQ1-like_CS ECOD (v295.2)
Chains Accession Name Type A ,
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R IPR054122 Gp138-like, beta-helical trimerization domain Domain A ,
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R IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain Domain A ,
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R IPR013046 Phage baseplate assembly protein V/Gp45 Family A ,
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R IPR037026 Vgr protein, OB-fold domain superfamily Homologous Superfamily