4RO1
An 3'-5'-exoribonuclease that specifically recognizes RNAs.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | KOG2102_1 | e4ro1B2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: KOG2102_1 | ECOD (1.6) |
A [auth B] | EUF07544 | e4ro1B3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: EUF07544 | ECOD (1.6) |
A [auth B] | RNB | e4ro1B1 | A: beta barrels | X: OB-fold | H: RNB domain-like (From Topology) | T: RNB domain-like | F: RNB | ECOD (1.6) |
B [auth A] | KOG2102_1 | e4ro1A3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: KOG2102_1 | ECOD (1.6) |
B [auth A] | EUF07544 | e4ro1A1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: EUF07544 | ECOD (1.6) |
B [auth A] | RNB | e4ro1A2 | A: beta barrels | X: OB-fold | H: RNB domain-like (From Topology) | T: RNB domain-like | F: RNB | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF17849 | Dis3-like cold-shock domain 2 (CSD2) (OB_Dis3) | Dis3-like cold-shock domain 2 (CSD2) | This domain has an OB fold and is found in the Dis3l2 protein [1]. This domain along with CSD1 binds to RNA. | Domain |
A [auth B], B [auth A] | PF22428 | DIS3-like exonuclease 2-like, C-terminal (Dis32-like_C) | DIS3-like exonuclease 2-like, C-terminal | This domain is found at the C-terminal end of DIS3-like exonuclease 2 from Schizosaccharomyces pombe (Dis32) and similar fungal proteins. Dis32, also known as Dis3l2, is a 3'-5'-exoribonuclease that specifically recognises RNAs polyuridylated at thei ... | Domain |
A [auth B], B [auth A] | PF00773 | RNB domain (RNB) | RNB domain | This domain is the catalytic domain of ribonuclease II [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR028591 | DIS3-like exonuclease 2 | Family |
A [auth B], B [auth A] | IPR050180 | RNR Ribonuclease | Family |
A [auth B], B [auth A] | IPR041505 | Dis3-like cold-shock domain 2 | Domain |
A [auth B], B [auth A] | IPR022966 | Ribonuclease II/R, conserved site | Conserved Site |
A [auth B], B [auth A] | IPR001900 | Ribonuclease II/R | Domain |
A [auth B], B [auth A] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |