Crystal structure of the COG4313 outer membrane channel from Pseudomonas putida F1
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Peptidase_S74 | e4rl8D1 | A: beta barrels | X: Repetitive alpha hairpins | H: C2 domain | T: C2 domain | F: Peptidase_S74 | ECOD (v294.2) |
| C | Glyco_hydro_31_3rd | e4rl8C1 | A: beta barrels | X: jelly-roll | H: Acetamidase/Formamidase-like | T: Acetamidase/Formamidase-like | F: Glyco_hydro_31_3rd | ECOD (v294.2) |
| B | PhyH | e4rl8B1 | A: beta barrels | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain | T: ssDNA-binding transcriptional regulator domain | F: PhyH | ECOD (v294.2) |
| A | PhyH | e4rl8A1 | A: beta barrels | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain | T: ssDNA-binding transcriptional regulator domain | F: PhyH | ECOD (v294.2) |
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Beta-barrel transmembrane | Porin/alpha-amylase family (n=12,S=14) | Porin/alpha-amylase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Beta-Barrel Membrane Proteins: Porins and Relatives | COG4313 outer membrane channel |














