4QUF
crystal structure of chromodomain of Rhino with H3K9me3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
K [auth F] | SCOP2B Superfamily | Chromo domain-like | 8063007 | 3000161 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Chromo domain-like | 8063007 | 3000161 | SCOP2B (2021-05-27) |
C [auth B] | SCOP2B Superfamily | Chromo domain-like | 8063007 | 3000161 | SCOP2B (2021-05-27) |
E [auth C] | SCOP2 Family | Chromo domain | 8063006 | 4000375 | SCOP2 (2021-05-27) |
E [auth C] | SCOP2 Superfamily | Chromo domain-like | 8063007 | 3000161 | SCOP2 (2021-05-27) |
G [auth D] | SCOP2B Superfamily | Chromo domain-like | 8063007 | 3000161 | SCOP2B (2021-05-27) |
I [auth E] | SCOP2B Superfamily | Chromo domain-like | 8063007 | 3000161 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
K [auth F] | PF00385 | e4qufF1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF00385 | ECOD (1.6) |
A | PF00385 | e4qufA1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF00385 | ECOD (1.6) |
C [auth B] | PF00385 | e4qufB1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF00385 | ECOD (1.6) |
E [auth C] | PF00385 | e4qufC1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF00385 | ECOD (1.6) |
G [auth D] | PF00385 | e4qufD1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF00385 | ECOD (1.6) |
I [auth E] | PF00385 | e4qufE1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF00385 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
K [auth F] | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
A | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
C [auth B] | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
E [auth C] | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
G [auth D] | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
I [auth E] | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00385 | Chromo (CHRromatin Organisation MOdifier) domain (Chromo) | Chromo (CHRromatin Organisation MOdifier) domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000953 | Chromo/chromo shadow domain | Domain | |
IPR049558 | Rhino, chromodomain | Domain | |
IPR023780 | Chromo domain | Domain | |
IPR016197 | Chromo-like domain superfamily | Homologous Superfamily | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR007125 | Histone H2A/H2B/H3 | Domain | |
IPR000164 | Histone H3/CENP-A | Family |