Co-Crystal Structure of Anti-anti-sigma factor PhyR complexed with Anti-sigma factor NepR from Bartonella quintana
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Defensin_1 | e4qicD1 | A: alpha arrays | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: Defensin_1 | ECOD (v295.2) |
| B | e4qicB1 | A: alpha arrays | X: Chlorophyll a-b binding protein | H: Chlorophyll a-b binding protein | T: Chlorophyll a-b binding protein | F: | ECOD (v295.2) | |
| C | Defensin_1 | e4qicC1 | A: alpha arrays | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: Defensin_1 | ECOD (v295.2) |
| A | e4qicA1 | A: alpha arrays | X: Chlorophyll a-b binding protein | H: Chlorophyll a-b binding protein | T: Chlorophyll a-b binding protein | F: | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 1.20.140.160 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
| C | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
| A | 1.20.140.160 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
| A | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Anti-sigma factor NepR | - | - | - | |
| Sensory transduction regulatory protein, Anti-anti-sigma factor PhyR | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR041649 | Anti-sigma factor NepR | Domain | |
| IPR014605 | Signal transduction response regulator PhyR-like, alphaproteobacteria | Family | |
| IPR011006 | CheY-like superfamily | Homologous Superfamily | |
| IPR001789 | Signal transduction response regulator, receiver domain | Domain | |
| IPR050595 | Bacterial response regulator | Family | |
| IPR053867 | PhyR, sigma4 domain | Domain | |
| IPR013324 | RNA polymerase sigma factor, region 3/4-like | Homologous Superfamily | |
| IPR053866 | PhyR, sigma2 domain | Domain |