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 4Q56 | pdb_00004q56

Structure of Helix aspersa agglutinin with natural glycosylation and N-acetyl-alpha-D-galactosamine (GalNAc)

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4q56a_ All beta proteins HPA-like Agglutinin HPA-like Agglutinin HPA-like automated matches (Cornu aspersum ) [TaxId: 6535 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyAgglutinin HPA-like 8085262 4001624 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAgglutinin HPA-like 8085263 3001999 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AResponse_rege4q56A1 A: alpha arraysX: C-terminal additional helical subdomain in reovirus polymerase lambda3H: C-terminal additional helical subdomain in reovirus polymerase lambda3T: C-terminal additional helical subdomain in reovirus polymerase lambda3F: Response_regECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.2080 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Helix aspersa agglutinin (HAA) -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR037221H-type lectin domain superfamilyHomologous Superfamily
IPR019019H-type lectin domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
PCA Parent Component: GLN

:  AA0031

:  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420