4Q4L
Crystal structure of an ATP synthase subunit beta 1 (F1-B1) from Burkholderia thailandensis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4q4la3 | All alpha proteins | Left-handed superhelix | C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases | automated matches | automated matches | (Burkholderia thailandensis E264 ) [TaxId: 271848 ], | SCOPe (2.08) |
A | d4q4la1 | All beta proteins | Domain of alpha and beta subunits of F1 ATP synthase-like | N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases | automated matches | automated matches | (Burkholderia thailandensis E264 ) [TaxId: 271848 ], | SCOPe (2.08) |
A | d4q4la2 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | automated matches | automated matches | (Burkholderia thailandensis E264 ) [TaxId: 271848 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ATP-synt_ab_N | e4q4lA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
A | ATP-synt_ab_C | e4q4lA1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
A | ATP-synt_ab | e4q4lA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.10.170 | Mainly Beta | Beta Barrel | Thrombin, subunit H | CATH (4.3.0) | |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A | 1.10.1140.10 | Mainly Alpha | Orthogonal Bundle | Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain | Chain D, domain3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | Domain | |
IPR024034 | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal | Homologous Superfamily | |
IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | Homologous Superfamily | |
IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | Active Site | |
IPR050053 | ATPase alpha/beta chains | Family | |
IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR005722 | ATP synthase, F1 complex, beta subunit | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |