Crystal structure of apeThermo-DBP-RP2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Thermo-DBP-RP2, C-terminal domain-like | 8055816 | 3002320 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | ThermoDBP N-terminal DNA-binding domain-like | 8055795 | 3002315 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | ThermoDBP N-terminal DNA-binding domain-like | 8055795 | 3002315 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Thermo-DBP-RP2, C-terminal domain-like | 8055816 | 3002320 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | ThermoDBP N-terminal DNA-binding domain-like | 8055795 | 3002315 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Thermo-DBP-RP2, C-terminal domain-like | 8055816 | 3002320 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | ThermoDBP N-terminal DNA-binding domain-like | 8051369 | 4007336 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Thermo-DBP-RP2, C-terminal domain-like | 8055815 | 4007657 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | ThermoDBP N-terminal DNA-binding domain-like | 8055795 | 3002315 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Thermo-DBP-RP2, C-terminal domain-like | 8055816 | 3002320 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Hemagglutinin | e4psnD1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Hemagglutinin | ECOD (v294.2) |
| C | ThermoDBP-RP_arch | e4psnC1 | A: beta barrels | X: Histone-like | H: ssDNA-binding protein ThermoDBP-related | T: ssDNA-binding protein ThermoDBP-related | F: ThermoDBP-RP_arch | ECOD (v294.2) |
| C | Thermo-DBP | e4psnC2 | A: beta barrels | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: Thermo-DBP | ECOD (v294.2) |
| B | Hemagglutinin | e4psnB1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Hemagglutinin | ECOD (v294.2) |
| A | Hemagglutinin | e4psnA1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Hemagglutinin | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF10015 | ThermoDBP-related, archaea (ThermoDBP-RP_arch) | ThermoDBP-related, archaea | - | Family | |
| PF20754 | Thermo-DBP-RP2 C-terminal domain (Thermo-DBP) | Thermo-DBP-RP2 C-terminal domain | This domain is found in proteins from archaea, including ThermoDBP- related protein (ThermoDBP-RP) 2 from hyperthermophilic crenarchaea. This protein shows great affinity in vitro for single-stranded DNA and consists of two globular domains. The C-te ... | Domain |
