Annotations: 4PCA

X-ray crystal structure of an O-methyltransferase from Anaplasma phagocytophilum bound to SAH and Manganese

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4pcad1	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	automated matches	automated matches	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)
D	d4pcad2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)
C	d4pcac1	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	automated matches	automated matches	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)
C	d4pcac2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)
B	d4pcab1	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	automated matches	automated matches	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)
B	d4pcab2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)
A	d4pcaa1	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	automated matches	automated matches	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)
A	d4pcaa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Anaplasma phagocytophilum str. HGE1 ) [TaxId: 1217107 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8085406	3000118	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8085406	3000118	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8085406	3000118	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8085406	3000118	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Hormone_recep	e4pcaD1	A: alpha arrays	X: HTH	H: HTH	T: winged helix domain	F: Hormone_recep	ECOD (v295.2)
C	Hormone_recep	e4pcaC1	A: alpha arrays	X: HTH	H: HTH	T: winged helix domain	F: Hormone_recep	ECOD (v295.2)
B	Hormone_recep	e4pcaB1	A: alpha arrays	X: HTH	H: HTH	T: winged helix domain	F: Hormone_recep	ECOD (v295.2)
A	Hormone_recep	e4pcaA1	A: alpha arrays	X: HTH	H: HTH	T: winged helix domain	F: Hormone_recep	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
C	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
B	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
A	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	O-methyltransferase family protein	transferase activity, transferring one-carbon groups transferase activity methyltransferase activity S-adenosylmethionine-dependent methyltransferase activity catalytic activity O-methyltransferase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A, B, C, D	IPR050362	Cation-dependent O-methyltransferase	Family
A, B, C, D	IPR002935	Class I-like SAM-dependent O-methyltransferase	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.