Crystal structure of Vibrio cholerae adenylation domain AlmE in complex with glycyl-adenosine-5'-phosphate
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.50.12780 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | ANL, N-terminal domain | CATH (4.3.0) |
| A | 3.30.300.30 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
AMR Gene: CARD Annotation CARD Database Homepage
| Chains | Accession | Short Name | Description | Provenance Source (Version) |
|---|---|---|---|---|
| ARO:3007433 | almE | almE is a glycyltransferase found in Vibrio cholerae that transfers glycine to the carrier protein almF. almE is part of the almEFG polymyxin resistance operon. | CARD (4.0.1) |
AMR Gene Family: CARD Annotation CARD Database Homepage
| Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
|---|---|---|---|---|---|
| ARO:3007432 | alm glycyltransferase | peptide antibiotic | antibiotic target alteration | CARD (4.0.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00501 | AMP-binding enzyme (AMP-binding) | AMP-binding enzyme | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR020845 | AMP-binding, conserved site | Conserved Site | |
| IPR042099 | ANL, N-terminal domain | Homologous Superfamily | |
| IPR045851 | AMP-binding enzyme domain superfamily | Homologous Superfamily | |
| IPR000873 | AMP-dependent synthetase/ligase domain | Domain | |
| IPR044507 | D-alanine:D-alanyl carrier protein ligase-like | Family |














