Crystal structure of SgcJ protein from Streptomyces carzinostaticus


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BTranspeptidasee4ovmB1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
JTranspeptidasee4ovmJ1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
ITranspeptidasee4ovmI1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
HTranspeptidasee4ovmH1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
GTranspeptidasee4ovmG1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
FTranspeptidasee4ovmF1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
ETranspeptidasee4ovmE1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
DTranspeptidasee4ovmD1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)
CEF-hand_1, EF-hand_7e4ovmC1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: EF-hand_1, EF-hand_7ECOD (v294.2)
ATranspeptidasee4ovmA1 A: beta barrelsX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TranspeptidaseECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
J3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
I3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
H3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
G3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
F3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
E3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
D3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
C3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
A3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR032710NTF2-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR027843Domain of unknown function DUF4440Domain
A, B, C, D, E
IPR011944Steroid delta5-4-isomeraseFamily