4OSJ | pdb_00004osj

Crystal structure of TAL effector reveals the recognition between asparagine and adenine

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
D [auth B]d4osjb1 All alpha proteins Left-handed alpha-alpha superhelix TAL effector-like TAL (transcription activator-like) effector automated matches (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], SCOPe (2.08)
D [auth B]d4osjb2 Artifacts Tags Tags Tags C-terminal Tags (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], SCOPe (2.08)
Ad4osja1 All alpha proteins Left-handed alpha-alpha superhelix TAL effector-like TAL (transcription activator-like) effector automated matches (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], SCOPe (2.08)
Ad4osja2 Artifacts Tags Tags Tags C-terminal Tags (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth B]e4osjB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: RIFT-relatedT: acid proteaseF:ECOD (v294.1)
ASpermine_synthe4osjA1 A: a/b three-layered sandwichesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Spermine_synthECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth J],
F [auth H]		DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3')---
B [auth I],
E [auth G]		DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3')---
A,
D [auth B]		Hax3- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D [auth B]		IPR053450Transcription activator-like effector proteinFamily
A,
D [auth B]		IPR005042TAL effector repeatRepeat