4OMK
Crystal structure of SPF bound to squalene
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4omka1 | All alpha proteins | RuvA C-terminal domain-like | CRAL/TRIO N-terminal domain | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d4omka2 | Alpha and beta proteins (a/b) | SpoIIaa-like | CRAL/TRIO domain | CRAL/TRIO domain | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4omkb1 | All alpha proteins | RuvA C-terminal domain-like | CRAL/TRIO N-terminal domain | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4omkb2 | Alpha and beta proteins (a/b) | SpoIIaa-like | CRAL/TRIO domain | CRAL/TRIO domain | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CRAL/TRIO domain | 8037987 | 3001058 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CRAL/TRIO N-terminal domain | 8037983 | 3001241 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CRAL/TRIO N-terminal domain | 8037983 | 3001241 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CRAL/TRIO domain | 8037987 | 3001058 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03765 | e4omkA2 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF03765 | ECOD (1.6) |
A | PF00650 | e4omkA1 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: PF00650 | ECOD (1.6) |
B | PF03765 | e4omkB1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF03765 | ECOD (1.6) |
B | PF00650 | e4omkB2 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: PF00650 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.525.10 | Alpha Beta | 3-Layer(aba) Sandwich | Phosphatidylinositol Transfer Protein Sec14p | CRAL-TRIO lipid binding domain | CATH (4.3.0) |
B | 3.40.525.10 | Alpha Beta | 3-Layer(aba) Sandwich | Phosphatidylinositol Transfer Protein Sec14p | CRAL-TRIO lipid binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00650 | CRAL/TRIO domain (CRAL_TRIO) | CRAL/TRIO domain | - | Domain | |
PF03765 | CRAL/TRIO, N-terminal domain (CRAL_TRIO_N) | CRAL/TRIO, N-terminal domain | This all-alpha domain is found to the N-terminus of Pfam:PF00650. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001251 | CRAL-TRIO lipid binding domain | Domain | |
IPR051064 | SEC14-like and CRAL-TRIO domain-containing protein | Family | |
IPR009038 | GOLD domain | Domain | |
IPR036865 | CRAL-TRIO lipid binding domain superfamily | Homologous Superfamily | |
IPR011074 | CRAL/TRIO, N-terminal domain | Domain | |
IPR036598 | GOLD domain superfamily | Homologous Superfamily | |
IPR036273 | CRAL/TRIO, N-terminal domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
O76054 | :