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Crystal Structure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide External Resource: Annotation Domain Annotation: SCOP2 Classification SCOP2 Database Homepage Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) B SCOP2B Superfamily Chondroitin AC/alginate lyase 8090377 3001005 SCOP2B (2021-05-27) B SCOP2B Superfamily Glycosyl hydrolase domain-like 8090379 3001528 SCOP2B (2021-05-27) B SCOP2B Superfamily Galactose mutarotase-like 8090375 3000035 SCOP2B (2021-05-27) A SCOP2B Superfamily Galactose mutarotase-like 8090375 3000035 SCOP2B (2021-05-27) A SCOP2B Superfamily Glycosyl hydrolase domain-like 8090379 3001528 SCOP2B (2021-05-27) A SCOP2B Superfamily Chondroitin AC/alginate lyase 8090377 3001005 SCOP2B (2021-05-27)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) B PF22686 e4ojzB1 A: beta sandwiches X: Glycosyl hydrolase domain-like H: Hyaluronate lyase-like, C-terminal domain (From Topology) T: Hyaluronate lyase-like, C-terminal domain F: PF22686 ECOD (1.6) B PF07940 e4ojzB2 A: beta sandwiches X: Glycosyl hydrolase domain-like H: supersandwich (From Topology) T: supersandwich F: PF07940 ECOD (1.6) B PF05426 e4ojzB3 A: alpha superhelices X: Repetitive alpha hairpins H: alpha/alpha toroid (From Topology) T: alpha/alpha toroid F: PF05426 ECOD (1.6) A PF22686 e4ojzA3 A: beta sandwiches X: Glycosyl hydrolase domain-like H: Hyaluronate lyase-like, C-terminal domain (From Topology) T: Hyaluronate lyase-like, C-terminal domain F: PF22686 ECOD (1.6) A PF07940 e4ojzA2 A: beta sandwiches X: Glycosyl hydrolase domain-like H: supersandwich (From Topology) T: supersandwich F: PF07940 ECOD (1.6) A PF05426 e4ojzA1 A: alpha superhelices X: Repetitive alpha hairpins H: alpha/alpha toroid (From Topology) T: alpha/alpha toroid F: PF05426 ECOD (1.6)
Chains Accession Name Description Comments Source PF22686 Exo-oligoalginate lyase-like, C-terminal domain (Alg17C_C) Exo-oligoalginate lyase-like, C-terminal domain This domain is found at the C-terminal end of Exo-oligoalginate lyase from Saccharophagus degradans (Alg17C) and similar sequences from proteobacteria. Alg17C catalyses the depolymerisation of alginate through an exolytic mode of action, via a beta-e ... This domain is found at the C-terminal end of Exo-oligoalginate lyase from Saccharophagus degradans (Alg17C) and similar sequences from proteobacteria. Alg17C catalyses the depolymerisation of alginate through an exolytic mode of action, via a beta-elimination mechanism. This protein consists of two domains: an N-terminal imperfect alpha-barrel (Pfam:PF05426) and a C-terminal beta-sheet domain (Pfam:PF07940 and this entry) [1]. This domain adopts an all-beta configuration. Less Domain PF07940 Heparinase II/III-like protein (Hepar_II_III) Heparinase II/III-like protein - Family PF05426 Alginate lyase (Alginate_lyase) Alginate lyase - Repeat
Chains Polymer Molecular Function Biological Process Cellular Component Putative alginate lyase