Annotations: 4OBU

Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (apo)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H [auth C]	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)
G [auth B]	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)
E [auth H]	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)
C [auth U]	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)
A [auth E]	SCOP2B Superfamily	PLP-dependent transferases	8097150	3000954	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth C]	H_PPase	e4obuC1	A: alpha arrays	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v295.2)
G [auth B]	H_PPase	e4obuB1	A: alpha arrays	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v295.2)
F	H_PPase	e4obuF1	A: alpha arrays	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v295.2)
E [auth H]	H_PPase	e4obuH1	A: alpha arrays	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v295.2)
D [auth G]	H_PPase	e4obuG1	A: alpha arrays	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v295.2)
C [auth U]	H_PPase	e4obuU1	A: alpha arrays	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v295.2)
B [auth A]	H_PPase	e4obuA1	A: alpha arrays	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v295.2)
A [auth E]	Fic	e4obuE1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Fic	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H [auth C]	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
H [auth C]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
G [auth B]	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
G [auth B]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
F	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
F	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
E [auth H]	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
E [auth H]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
D [auth G]	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
D [auth G]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
C [auth U]	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
C [auth U]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
B [auth A]	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
B [auth A]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
A [auth E]	3.90.1150.170	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1		CATH (4.3.0)
A [auth E]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], F, G [auth B], H [auth C]	Pyridoxal-dependent decarboxylase domain protein	vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding anion binding heterocyclic compound binding small molecule binding L-tryptophan decarboxylase activity aromatic-L-amino-acid decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], F, G [auth B], H [auth C]	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily
A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], F, G [auth B], H [auth C]	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily
A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], F, G [auth B], H [auth C]	IPR010977	Aromatic-L-amino-acid decarboxylase	Family
A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], F, G [auth B], H [auth C]	IPR002129	Pyridoxal phosphate-dependent decarboxylase, major domain	Domain
A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], F, G [auth B], H [auth C]	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	Homologous Superfamily
A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], A [auth E], B [auth A], C [auth U], D [auth G], E [auth H], F, G [auth B], H [auth C]	IPR021115	Pyridoxal-phosphate binding site	Binding Site