4NK8
Crystal Structure of the periplasmic alginate epimerase AlgG D317A mutant
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_120 | e4nk8A1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: Glyco_hydro_120 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.160.20.10 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | Single-stranded right-handed beta-helix, Pectin lyase-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13229 | Right handed beta helix region (Beta_helix) | Right handed beta helix region | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012334 | Pectin lyase fold | Homologous Superfamily | |
IPR051550 | SCF Complex Subunits and Alginate Epimerases | Family | |
IPR039448 | Right handed beta helix domain | Domain | |
IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | Domain | |
IPR006626 | Parallel beta-helix repeat | Repeat | |
IPR053409 | Mannuronan C5-epimerase | Family | |
IPR022441 | Parallel beta-helix repeat-2 | Repeat | |
IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily |