4MB5
Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella complex with Nag5
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | E set domains | 8090840 | 3000070 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | (Trans)glycosidases | 8090844 | 3000313 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Carbohydrate binding domain-like | 8090846 | 3001641 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | E set domains | 8090842 | 3000070 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CBM_5_12 | e4mb5A4 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: CBM_5_12 | ECOD (1.6) |
A | DUF5011 | e4mb5A5 | A: beta sandwiches | X: A putative surface protein (From Topology) | H: A putative surface protein (From Topology) | T: A putative surface protein | F: DUF5011 | ECOD (1.6) |
A | Glyco_hydro_18_1 | e4mb5A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_18_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
A | 2.10.10.20 | Mainly Beta | Ribbon | Seminal Fluid Protein PDC-109 (Domain B) | Carbohydrate-binding module superfamily 5/12 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00704 | Glycosyl hydrolases family 18 (Glyco_hydro_18) | Glycosyl hydrolases family 18 | - | Domain | |
PF02839 | Carbohydrate-binding module family 5/12 (CBM_5_12) | Carbohydrate-binding module family 5/12 | - | Family | |
PF16403 | Bacterial surface protein, Ig-like domain (Bact_surface_Ig-like) | Bacterial surface protein, Ig-like domain | This entry represents a bacterial immunoglobulin-like domain found in bacterial proteins, including Pesticidal crystal protein Cry22Aa from Bacillus thuringiensis, a protein with a toxic effect on several insect larvae and Chitinase 60 from Moritella ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001579 | Glycosyl hydrolase family 18, active site | Active Site | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR003610 | Carbohydrate binding module family 5/12 | Domain | |
IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain | |
IPR032179 | Pesticidal crystal protein Cry22Aa, Ig-like domain | Domain | |
IPR011583 | Chitinase II/V-like, catalytic domain | Domain | |
IPR051024 | GlcNAc and Chitin Interaction and Degradation | Family | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR036573 | Carbohydrate-binding module superfamily 5/12 | Homologous Superfamily |