4LQL
Crystal structure of L-arabinose isomerase from Lactobacillus fermentum CGMCC2921
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Arabinose_Iso_C | e4lqlA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Arabinose_Iso_C | ECOD (1.6) |
A | Arabinose_Isome | e4lqlA3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: L-fucose isomerase, N-terminal and second domains | F: Arabinose_Isome | ECOD (1.6) |
B | Arabinose_Iso_C | e4lqlB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Arabinose_Iso_C | ECOD (1.6) |
B | Arabinose_Isome | e4lqlB3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: L-fucose isomerase, N-terminal and second domains | F: Arabinose_Isome | ECOD (1.6) |
C | Arabinose_Iso_C | e4lqlC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Arabinose_Iso_C | ECOD (1.6) |
C | Arabinose_Isome | e4lqlC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: L-fucose isomerase, N-terminal and second domains | F: Arabinose_Isome | ECOD (1.6) |
D | Arabinose_Iso_C | e4lqlD2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Arabinose_Iso_C | ECOD (1.6) |
D | Arabinose_Isome | e4lqlD3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: L-fucose isomerase, N-terminal and second domains | F: Arabinose_Isome | ECOD (1.6) |
E | Arabinose_Iso_C | e4lqlE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Arabinose_Iso_C | ECOD (1.6) |
E | Arabinose_Isome | e4lqlE2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: L-fucose isomerase, N-terminal and second domains | F: Arabinose_Isome | ECOD (1.6) |
F | Arabinose_Iso_C | e4lqlF2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Arabinose_Iso_C | ECOD (1.6) |
F | Arabinose_Isome | e4lqlF3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: L-fucose isomerase, N-terminal and second domains | F: Arabinose_Isome | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.10940 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 3.40.50.10940 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C | 3.40.50.10940 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
D | 3.40.50.10940 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
E | 3.40.50.10940 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
F | 3.40.50.10940 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11762 | L-arabinose isomerase C-terminal domain (Arabinose_Iso_C) | L-arabinose isomerase C-terminal domain | This is a family of L-arabinose isomerases, AraA, EC:5.3.1.4. These enzymes catalyse the reaction: L-arabinose <=> L-ribulose. This reaction is the first step in the pathway of L-arabinose utilisation as a carbon source after entering the cell L-ar ... | Domain | |
PF02610 | L-arabinose isomerase (Arabinose_Isome) | L-arabinose isomerase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009015 | L-fucose isomerase, N-terminal/central domain superfamily | Homologous Superfamily | |
IPR003762 | L-arabinose isomerase | Family | |
IPR038583 | L-arabinose isomerase, N-terminal domain superfamily | Homologous Superfamily | |
IPR024664 | L-arabinose isomerase, C-terminal | Domain | |
IPR004216 | L-fucose/L-arabinose isomerase, C-terminal | Homologous Superfamily |