Annotations: 4LQL

Crystal structure of L-arabinose isomerase from Lactobacillus fermentum CGMCC2921

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	MNNL	e4lqlF2	A: beta barrels	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: MNNL	ECOD (v294.2)
F	YkuD	e4lqlF3	A: beta barrels	X: Cytidine deaminase-like	H: KorB C-terminal domain	T: KorB C-terminal domain	F: YkuD	ECOD (v294.2)
E	MNNL	e4lqlE1	A: beta barrels	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: MNNL	ECOD (v294.2)
E	YkuD	e4lqlE2	A: beta barrels	X: Cytidine deaminase-like	H: KorB C-terminal domain	T: KorB C-terminal domain	F: YkuD	ECOD (v294.2)
D	MNNL	e4lqlD2	A: beta barrels	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: MNNL	ECOD (v294.2)
D	YkuD	e4lqlD3	A: beta barrels	X: Cytidine deaminase-like	H: KorB C-terminal domain	T: KorB C-terminal domain	F: YkuD	ECOD (v294.2)
C	MNNL	e4lqlC1	A: beta barrels	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: MNNL	ECOD (v294.2)
C	YkuD	e4lqlC2	A: beta barrels	X: Cytidine deaminase-like	H: KorB C-terminal domain	T: KorB C-terminal domain	F: YkuD	ECOD (v294.2)
B	Nop10p	e4lqlB2	A: beta barrels	X: OB-fold	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: Nop10p	ECOD (v294.2)
B	YkuD	e4lqlB3	A: beta barrels	X: Cytidine deaminase-like	H: KorB C-terminal domain	T: KorB C-terminal domain	F: YkuD	ECOD (v294.2)
A	MNNL	e4lqlA2	A: beta barrels	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: MNNL	ECOD (v294.2)
A	YkuD	e4lqlA3	A: beta barrels	X: Cytidine deaminase-like	H: KorB C-terminal domain	T: KorB C-terminal domain	F: YkuD	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Provenance Source (Version)
F	3.40.50.10940	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CATH (4.3.0)
E	3.40.50.10940	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CATH (4.3.0)
D	3.40.50.10940	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CATH (4.3.0)
C	3.40.50.10940	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CATH (4.3.0)
B	3.40.50.10940	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CATH (4.3.0)
A	3.40.50.10940	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	L-arabinose isomerase	isomerase activity L-arabinose isomerase activity intramolecular oxidoreductase activity, interconverting aldoses and ketoses intramolecular oxidoreductase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR009015	L-fucose isomerase, N-terminal/central domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR003762	L-arabinose isomerase	Family
A, B, C, D, E A, B, C, D, E, F	IPR055390	L-arabinose isomerase, central domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR038583	L-arabinose isomerase, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR055389	L-arabinose isomerase, N-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR024664	L-arabinose isomerase, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F	IPR004216	L-fucose/L-arabinose isomerase, C-terminal	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

4LQL | pdb_00004lql

Crystal structure of L-arabinose isomerase from Lactobacillus fermentum CGMCC2921

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage