4LMO
Structure of a vertebrate RNA binding domain of telomerase (TRBD)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Telomerase RBD-like | 8047109 | 4005451 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TERT TR-binding domain-like | 8052455 | 3002119 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | TERT TR-binding domain-like | 8052455 | 3002119 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | TERT TR-binding domain-like | 8052455 | 3002119 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | TERT TR-binding domain-like | 8052455 | 3002119 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Telomerase_RBD | e4lmoA1 | A: alpha arrays | X: RNA-binding domain of telomerase (From Topology) | H: RNA-binding domain of telomerase (From Topology) | T: RNA-binding domain of telomerase | F: Telomerase_RBD | ECOD (1.6) |
B | Telomerase_RBD | e4lmoB1 | A: alpha arrays | X: RNA-binding domain of telomerase (From Topology) | H: RNA-binding domain of telomerase (From Topology) | T: RNA-binding domain of telomerase | F: Telomerase_RBD | ECOD (1.6) |
C | Telomerase_RBD | e4lmoC1 | A: alpha arrays | X: RNA-binding domain of telomerase (From Topology) | H: RNA-binding domain of telomerase (From Topology) | T: RNA-binding domain of telomerase | F: Telomerase_RBD | ECOD (1.6) |
D | Telomerase_RBD | e4lmoD1 | A: alpha arrays | X: RNA-binding domain of telomerase (From Topology) | H: RNA-binding domain of telomerase (From Topology) | T: RNA-binding domain of telomerase | F: Telomerase_RBD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.132.70 | Mainly Alpha | Orthogonal Bundle | Topoisomerase I | Chain A, domain 4 | CATH (4.3.0) |
B | 1.10.132.70 | Mainly Alpha | Orthogonal Bundle | Topoisomerase I | Chain A, domain 4 | CATH (4.3.0) |
C | 1.10.132.70 | Mainly Alpha | Orthogonal Bundle | Topoisomerase I | Chain A, domain 4 | CATH (4.3.0) |
D | 1.10.132.70 | Mainly Alpha | Orthogonal Bundle | Topoisomerase I | Chain A, domain 4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12009 | Telomerase ribonucleoprotein complex - RNA binding domain (Telomerase_RBD) | Telomerase ribonucleoprotein complex - RNA binding domain | Telomeres in most organisms are comprised of tandem simple sequence repeats [1]. The total length of telomeric repeat sequence at each chromosome end is determined in a balance of sequence loss and sequence addition [1]. One major influence on telome ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR021891 | Telomerase ribonucleoprotein complex - RNA-binding domain | Domain | |
IPR049139 | Telomerase reverse transcriptase, C-terminal extension | Domain | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily | |
IPR000477 | Reverse transcriptase domain | Domain | |
IPR003545 | Telomerase reverse transcriptase | Family |