4LD8
Crystal Structure of Dimeric Sudan Virus VP40
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4ld8a1 | All beta proteins | EV matrix protein | EV matrix protein | EV matrix protein | automated matches | SEBOV (Sudan ebolavirus ) [TaxId: 186540 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | VP40_C | e4ld8A3 | A: beta barrels | X: EV matrix protein (From Homology) | H: EV matrix protein | T: EV matrix protein | F: VP40_C | ECOD (1.6) |
A | VP40_N | e4ld8A1 | A: beta barrels | X: EV matrix protein (From Homology) | H: EV matrix protein | T: EV matrix protein | F: VP40_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.70.20.20 | Mainly Beta | Distorted Sandwich | Topoisomerase I | domain 3 | CATH (4.3.0) |
A | 2.60.510.10 | Mainly Beta | Sandwich | EV matrix protein fold | EV matrix protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07447 | Matrix protein VP40 (VP40) | Matrix protein VP40 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR043079 | EV matrix protein, N-terminal | Homologous Superfamily | |
IPR008986 | EV matrix protein | Family | |
IPR038057 | EV matrix domain superfamily | Homologous Superfamily | |
IPR035092 | EV matrix protein, C-terminal | Homologous Superfamily |