4L0P
Structure of the human EphA3 receptor ligand binding domain complexed with ephrin-A5
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4l0pa1 | All beta proteins | Galactose-binding domain-like | Galactose-binding domain-like | Ephrin receptor ligand binding domain | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d4l0pa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4l0pb_ | All beta proteins | Cupredoxin-like | Cupredoxins | Ephrin ectodomain | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Ephrin receptor ligand binding domain | 8082073 | 4002471 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | galactose-binding domain-like | 8082074 | 3000087 | SCOP2 (2022-06-29) |
B | SCOP2 Family | Ephrin ectodomain | 8081941 | 4002092 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Cupredoxins | 8081942 | 3000886 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ephrin_lbd | e4l0pA1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Ephrin_lbd | ECOD (1.6) |
B | Ephrin | e4l0pB1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Ephrin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
B | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01404 | Ephrin receptor ligand binding domain (Ephrin_lbd) | Ephrin receptor ligand binding domain | The Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1]. | Domain | |
PF00812 | Ephrin (Ephrin) | Ephrin | - | Domain |