4KW3
Crystal structure of the non-structural protein 1 N-terminal origin-recognition/nickase domain from the emerging human bocavirus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF22419 | e4kw3A2 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: PF22419 | ECOD (1.6) |
B | PF22419 | e4kw3B2 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: PF22419 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1310.20 | Alpha Beta | 3-Layer(aba) Sandwich | Replication Protein E1 | Chain: A, | CATH (4.3.0) |
B | 3.40.1310.20 | Alpha Beta | 3-Layer(aba) Sandwich | Replication Protein E1 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22419 | Human bocavirus Nonstructural protein 1-like, N-terminal domain (HBoV_NS1-like_N) | Human bocavirus Nonstructural protein 1-like, N-terminal domain | This entry represents the Human bocavirus 1 (HBoV1) nonstructural protein 1 (NS1) N-terminal domain. HBoV-NS1 is a member of the histidine-hydrophobic-histidine (HUH) superfamily of endonucleases [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049901 | Parvovirus NS1 nuclease, NS1-Nuc domain | Domain | |
IPR014015 | Helicase, superfamily 3, DNA virus | Domain | |
IPR001257 | Parvovirus non-structural protein 1, helicase domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |