4JX0
Crystal structure of a two domain protein with unknown function (BF3416) from Bacteroides fragilis NCTC 9343 at 2.90 A resolution
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | BT3507 N-terminal domain-like | 8050953 | 4004454 | SCOP2 (2021-05-27) |
A | SCOP2 Family | BF3416 C-terminal domain-like | 8090516 | 4007707 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | E set domains | 8090515 | 3000070 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | galactose-binding domain-like | 8090517 | 3000087 | SCOP2 (2021-05-27) |
B | SCOP2B Superfamily | galactose-binding domain-like | 8090517 | 3000087 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | E set domains | 8090515 | 3000070 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e4jx0A2 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF08522 | e4jx0A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08522 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4jx0B1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF08522 | e4jx0B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08522 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1510 | Mainly Beta | Sandwich | Immunoglobulin-like | ntegrin, alpha v. Chain A, domain 3 | CATH (4.3.0) |
A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
B | 2.60.40.1510 | Mainly Beta | Sandwich | Immunoglobulin-like | ntegrin, alpha v. Chain A, domain 3 | CATH (4.3.0) |
B | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08522 | BT_3987-like, N-terminal domain (BT_3987-like_N) | BT_3987-like, N-terminal domain | This domain, previously known as DUF1735, is found in a number of proteins mainly found in firmicutes, including BT_3987 from Bacteroides thetaiotaomicron, which displays hydrolytic activity against Hy-type N-glycans, probably initiating the degradat ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
hypothetical protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013728 | BT_3987-like, N-terminal domain | Domain | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily |