4JWI
Crystal structure of the substrate binding domain of E.coli DnaK in complex with sheep Bac7(35-43)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | heat shock protein 70kd (hsp70) peptide-binding domain | 8035545 | 3000642 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Heat shock protein 70kD (HSP70) C-terminal subdomain | 8035544 | 3000668 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | heat shock protein 70kd (hsp70) peptide-binding domain | 8035545 | 3000642 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Heat shock protein 70kD (HSP70) C-terminal subdomain | 8035544 | 3000668 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00012 | e4jwiA1 | A: beta sandwiches | X: Heat shock protein 70kD (HSP70), peptide-binding domain (From Topology) | H: Heat shock protein 70kD (HSP70), peptide-binding domain (From Topology) | T: Heat shock protein 70kD (HSP70), peptide-binding domain | F: PF00012 | ECOD (1.6) |
A | PF00012 | e4jwiA2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Heat shock protein 70kD (HSP70), C-terminal subdomain (From Topology) | T: Heat shock protein 70kD (HSP70), C-terminal subdomain | F: PF00012 | ECOD (1.6) |
B | PF00012 | e4jwiB1 | A: beta sandwiches | X: Heat shock protein 70kD (HSP70), peptide-binding domain (From Topology) | H: Heat shock protein 70kD (HSP70), peptide-binding domain (From Topology) | T: Heat shock protein 70kD (HSP70), peptide-binding domain | F: PF00012 | ECOD (1.6) |
B | PF00012 | e4jwiB2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Heat shock protein 70kD (HSP70), C-terminal subdomain (From Topology) | T: Heat shock protein 70kD (HSP70), C-terminal subdomain | F: PF00012 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.34.10 | Mainly Beta | Sandwich | Substrate Binding Domain Of DNAk | Chain A, domain 1 | CATH (4.3.0) |
A | 1.20.1270.10 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.3.0) |
B | 2.60.34.10 | Mainly Beta | Sandwich | Substrate Binding Domain Of DNAk | Chain A, domain 1 | CATH (4.3.0) |
B | 1.20.1270.10 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00012 | Hsp70 protein (HSP70) | Hsp70 protein | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018181 | Heat shock protein 70, conserved site | Conserved Site | |
IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily | |
IPR012725 | Chaperone DnaK | Family | |
IPR029048 | Heat shock protein 70kD, C-terminal domain superfamily | Homologous Superfamily | |
IPR029047 | Heat shock protein 70kD, peptide-binding domain superfamily | Homologous Superfamily | |
IPR013126 | Heat shock protein 70 family | Family | |
IPR001894 | Cathelicidin-like | Family | |
IPR018216 | Cathelicidin, conserved site | Conserved Site | |
IPR046350 | Cystatin superfamily | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
NH2 | AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 :  L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109 | :