4JK0
Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | d4jk0d1 | Alpha and beta proteins (a+b) | Tombusvirus P19 core protein, VP19 | Tombusvirus P19 core protein, VP19 | Tombusvirus P19 core protein, VP19 | automated matches | TBSV (Tomato bushy stunt virus ) [TaxId: 12145 ], | SCOPe (2.08) |
A [auth D] | d4jk0d2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | TBSV (Tomato bushy stunt virus ) [TaxId: 12145 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | Tombus_P19 | e4jk0D1 | A: a+b two layers | X: Tombusvirus P19 core protein, VP19 (From Topology) | H: Tombusvirus P19 core protein, VP19 (From Topology) | T: Tombusvirus P19 core protein, VP19 | F: Tombus_P19 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth D] | 3.30.390.180 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D] | PF03220 | Tombusvirus P19 core protein (Tombus_P19) | Tombusvirus P19 core protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D] | IPR036131 | Tombusvirus P19 superfamily | Homologous Superfamily |
A [auth D] | IPR004905 | Tombusvirus p19 core protein | Family |