4J2C
GARP-SNARE Interaction
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Syntaxin-6_N | e4j2cA1 | A: alpha bundles | X: STAT-like | H: t-snare proteins (From Topology) | T: t-snare proteins | F: Syntaxin-6_N | ECOD (1.6) |
C | Syntaxin-6_N | e4j2cC1 | A: alpha bundles | X: STAT-like | H: t-snare proteins (From Topology) | T: t-snare proteins | F: Syntaxin-6_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.58.90 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
C | 1.20.58.90 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09177 | Syntaxin 6, N-terminal (Syntaxin-6_N) | Syntaxin 6, N-terminal | Members of this family, which are found in the amino terminus of various SNARE proteins, adopt a structure consisting of an antiparallel three-helix bundle. Their exact function has not been determined, though it is known that they regulate the SNARE ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR015260 | Syntaxin 6, N-terminal | Domain | |
IPR006012 | Syntaxin/epimorphin, conserved site | Conserved Site | |
IPR010989 | SNARE | Homologous Superfamily | |
IPR045242 | Syntaxin | Family | |
IPR014812 | Vacuolar protein sorting-associated protein 51 | Family | |
IPR016159 | Cullin repeat-like-containing domain superfamily | Homologous Superfamily |