4GRI
Crystal structure of a glutamyl-tRNA synthetase GluRS from Borrelia burgdorferi bound to glutamic acid and zinc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF19269 | e4griA2 | A: alpha arrays | X: HTH | H: An anticodon-binding domain of class I aminoacyl-tRNA synthetases (From Topology) | T: An anticodon-binding domain of class I aminoacyl-tRNA synthetases | F: PF19269 | ECOD (1.6) |
A | PF00749 | e4griA5 | A: alpha bundles | X: Zn-binding domain in glutaminyl-tRNA synthetase (From Topology) | H: Zn-binding domain in glutaminyl-tRNA synthetase (From Topology) | T: Zn-binding domain in glutaminyl-tRNA synthetase | F: PF00749 | ECOD (1.6) |
A | PF00749 | e4griA3 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: PF00749 | ECOD (1.6) |
B | PF19269 | e4griB4 | A: alpha arrays | X: HTH | H: An anticodon-binding domain of class I aminoacyl-tRNA synthetases (From Topology) | T: An anticodon-binding domain of class I aminoacyl-tRNA synthetases | F: PF19269 | ECOD (1.6) |
B | PF00749 | e4griB5 | A: alpha bundles | X: Zn-binding domain in glutaminyl-tRNA synthetase (From Topology) | H: Zn-binding domain in glutaminyl-tRNA synthetase (From Topology) | T: Zn-binding domain in glutaminyl-tRNA synthetase | F: PF00749 | ECOD (1.6) |
B | PF00749 | e4griB2 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: PF00749 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
A | 3.90.800.10 | Alpha Beta | Alpha-Beta Complex | Glutamyl-tRNA Synthetase | domain 3 | CATH (4.3.0) |
A | 1.10.1160.10 | Mainly Alpha | Orthogonal Bundle | Glutamyl-tRNA Synthetase | domain 2 | CATH (4.3.0) |
A | 1.10.8.70 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
A | 1.10.10.350 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) | |
B | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
B | 3.90.800.10 | Alpha Beta | Alpha-Beta Complex | Glutamyl-tRNA Synthetase | domain 3 | CATH (4.3.0) |
B | 1.10.1160.10 | Mainly Alpha | Orthogonal Bundle | Glutamyl-tRNA Synthetase | domain 2 | CATH (4.3.0) |
B | 1.10.8.70 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
B | 1.10.10.350 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF19269 | Anticodon binding domain (Anticodon_2) | Anticodon binding domain | This entry represents the anticodon binding domain found at the C-terminus of the class-I glutamyl tRNA synthetase enzyme. | Domain | |
PF00749 | tRNA synthetases class I (E and Q), catalytic domain (tRNA-synt_1c) | tRNA synthetases class I (E and Q), catalytic domain | Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only glutamyl and glutaminyl tRNA synthetases. In some organisms, a single glutamyl-tRNA synthetase aminoacylates both tRNA(Glu) and tRNA(Gln). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020751 | Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 | Homologous Superfamily | |
IPR000924 | Glutamyl/glutaminyl-tRNA synthetase | Family | |
IPR033910 | Glutamyl-tRNA synthetase | Domain | |
IPR020061 | Glutamine-tRNA ligase, alpha-bundle domain superfamily | Homologous Superfamily | |
IPR020058 | Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain | Domain | |
IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily | |
IPR045462 | Aminoacyl-tRNA synthetase, class I, anticodon-binding | Domain | |
IPR049940 | Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase | Family | |
IPR004527 | Glutamate-tRNA ligase, bacterial/mitochondrial | Family | |
IPR020752 | Glutamate-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 | Homologous Superfamily | |
IPR008925 | Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily | Homologous Superfamily |