4GQ2
S. pombe Nup120-Nup37 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth M] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090975 | 3000456 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth M] | Nup160 | e4gq2M1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Nup160 | ECOD (1.6) |
A [auth M] | EUF08018 | e4gq2M2 | A: alpha arrays | X: Nucleoporin NUP120 helical domain (From Topology) | H: Nucleoporin NUP120 helical domain (From Topology) | T: Nucleoporin NUP120 helical domain | F: EUF08018 | ECOD (1.6) |
A [auth M] | KOG4521_2nd | e4gq2M5 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: KOG4521_2nd | ECOD (1.6) |
B [auth P] | ANAPC4_WD40_2 | e4gq2P2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth P] | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth M] | PF21486 | Nucleoporin NUP120, helical domain (NUP120_helical) | Nucleoporin NUP120, helical domain | This entry represents the helical domain of Nup120 from S. pombe referred to as the irregular helical bundle (IHB) [1,2], which makes extensive contacts with the propeller and helical bundle at the N-terminal. Nup120 functions as a component of the n ... | Domain |
A [auth M] | PF11715 | Nucleoporin Nup120/160 (Nup160) | Nucleoporin Nup120/160 | - | Repeat |
B [auth P] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth M] | IPR048884 | Nucleoporin Nup120, helical domain | Domain |
A [auth M] | IPR021717 | Nucleoporin Nup120/160 | Family |
B [auth P] | IPR037626 | Nucleoporin Nup37 | Family |
B [auth P] | IPR001680 | WD40 repeat | Repeat |
B [auth P] | IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
B [auth P] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |