4FOO
Crystal Structure of Shikimate Dehydrogenase (aroE) Q237K Mutant from Helicobacter pylori
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4fooa2 | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Helicobacter pylori 26695 ) [TaxId: 85962 ], | SCOPe (2.08) |
A | d4fooa1 | Alpha and beta proteins (a/b) | Aminoacid dehydrogenase-like, N-terminal domain | Aminoacid dehydrogenase-like, N-terminal domain | automated matches | automated matches | (Helicobacter pylori 26695 ) [TaxId: 85962 ], | SCOPe (2.08) |
B | d4foob2 | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Helicobacter pylori 26695 ) [TaxId: 85962 ], | SCOPe (2.08) |
B | d4foob1 | Alpha and beta proteins (a/b) | Aminoacid dehydrogenase-like, N-terminal domain | Aminoacid dehydrogenase-like, N-terminal domain | automated matches | automated matches | (Helicobacter pylori 26695 ) [TaxId: 85962 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Shikimate_DH | e4fooA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Shikimate_DH | ECOD (1.6) |
A | Shikimate_dh_N | e4fooA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Aminoacid dehydrogenase-like, N-terminal domain | F: Shikimate_dh_N | ECOD (1.6) |
B | Shikimate_DH | e4fooB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Shikimate_DH | ECOD (1.6) |
B | Shikimate_dh_N | e4fooB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Aminoacid dehydrogenase-like, N-terminal domain | F: Shikimate_dh_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.10860 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Leucine Dehydrogenase, chain A, domain 1 | CATH (4.3.0) |
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 3.40.50.10860 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Leucine Dehydrogenase, chain A, domain 1 | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08501 | Shikimate dehydrogenase substrate binding domain (Shikimate_dh_N) | Shikimate dehydrogenase substrate binding domain | This domain is the substrate binding domain of shikimate dehydrogenase [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR046346 | Aminoacid dehydrogenase-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR022893 | Shikimate dehydrogenase family | Family | |
IPR011342 | Shikimate dehydrogenase | Family | |
IPR013708 | Shikimate dehydrogenase substrate binding, N-terminal | Domain |