Three dimensional structure of the double mutant of UPF0176 protein lpg2838 from Legionella pneumophila at the resolution 1.8A, Northeast Structural Genomics Consortium (NESG) Target LgR82
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Rhodanese | e4f67A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Rhodanese | ECOD (v294.1) |
| A | RRM_1 | e4f67A2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RRM_1 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.70.100 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| A | 3.40.250.10 | Alpha Beta | 3-Layer(aba) Sandwich | Oxidized Rhodanese | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF17773 | UPF0176 acylphosphatase like domain (UPF0176_N) | UPF0176 acylphosphatase like domain | This domain is found at the N-terminus of UPF0176 family proteins. It adopts a fold similar to the Pfam:PF00708 family. | Domain | |
| PF00581 | Rhodanese-like domain (Rhodanese) | Rhodanese-like domain | Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001763 | Rhodanese-like domain | Domain | |
| IPR036873 | Rhodanese-like domain superfamily | Homologous Superfamily | |
| IPR020936 | tRNA uridine(34) hydroxylase | Family | |
| IPR040503 | tRNA uridine(34) hydroxylase, N-terminal | Domain |














