4F0P
MspJI Restriction Endonuclease - P31 Form
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07528 | e4f0pA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: EUF07528 | ECOD (1.6) |
A | Mrr_cat | e4f0pA2 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: Mrr_cat | ECOD (1.6) |
B | EUF07528 | e4f0pB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: EUF07528 | ECOD (1.6) |
B | Mrr_cat | e4f0pB2 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: Mrr_cat | ECOD (1.6) |
C | EUF07528 | e4f0pC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: EUF07528 | ECOD (1.6) |
C | Mrr_cat | e4f0pC2 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: Mrr_cat | ECOD (1.6) |
D | EUF07528 | e4f0pD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: EUF07528 | ECOD (1.6) |
D | Mrr_cat | e4f0pD2 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: Mrr_cat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.280.20 | Mainly Beta | Roll | PUA domain-like | CATH (4.3.0) | |
A | 3.40.1350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Trna Endonuclease | Chain: A, domain 1 | CATH (4.3.0) |
B | 2.30.280.20 | Mainly Beta | Roll | PUA domain-like | CATH (4.3.0) | |
B | 3.40.1350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Trna Endonuclease | Chain: A, domain 1 | CATH (4.3.0) |
C | 2.30.280.20 | Mainly Beta | Roll | PUA domain-like | CATH (4.3.0) | |
C | 3.40.1350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Trna Endonuclease | Chain: A, domain 1 | CATH (4.3.0) |
D | 2.30.280.20 | Mainly Beta | Roll | PUA domain-like | CATH (4.3.0) | |
D | 3.40.1350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Trna Endonuclease | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04471 | Restriction endonuclease (Mrr_cat) | Restriction endonuclease | - | Family | |
PF18062 | Restriction endonuclease AspBHI N-terminal (RE_AspBHI_N) | Restriction endonuclease AspBHI N-terminal | This is the N-terminal domain found in modification-dependent restriction endonuclease proteins such as AspBHI, which can be found in Azoarcus sp. AspBHI is a homo-tetrameric protein that recognizes 5-methylcytosine in the double-strand DNA sequence ... | Domain |