4EFJ
Crystal structure of I-GzeII LAGLIDADG homing endonuclease in complex with DNA target site
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | LAGLIDADG_1 | e4efjA3 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: LAGLIDADG_1 | ECOD (1.6) |
F [auth B] | LAGLIDADG_1 | e4efjB3 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: LAGLIDADG_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth A] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
F [auth B] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth A], F [auth B] | PF00961 | LAGLIDADG endonuclease (LAGLIDADG_1) | LAGLIDADG endonuclease | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth C], C [auth E] | DNA target site top strand | - | - | - |
E [auth A], F [auth B] | LAGLIDADG endonuclease | - | ||
B [auth D], D [auth F] | DNA target site bottom strand | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E [auth A], F [auth B] | IPR051289 | LAGLIDADG Homing Endonuclease | Family |
E [auth A], F [auth B] | IPR004860 | Homing endonuclease, LAGLIDADG domain | Domain |
E [auth A], F [auth B] | IPR027434 | Homing endonuclease | Homologous Superfamily |