4EF1
Crystal structure of a pheromone cOB1 precursor/lipoprotein, YaeC family (EF2496) from Enterococcus faecalis V583 at 1.90 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4ef1a_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Enterococcus faecalis V583 ) [TaxId: 226185 ], | SCOPe (2.08) |
B | d4ef1b_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Enterococcus faecalis V583 ) [TaxId: 226185 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Phosphate binding protein-like | 8058949 | 4000229 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Type 2 solute binding protein-like | 8058950 | 3000083 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058950 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03180 | e4ef1A1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF03180 | ECOD (1.6) |
B | PF03180 | e4ef1B2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF03180 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03180 | NlpA lipoprotein (Lipoprotein_9) | NlpA lipoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Pheromone cOB1/lipoprotein, YaeC family | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004872 | Lipoprotein NlpA family | Family |