Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyRecA-like P-loop NTPases 8042358 3002019 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPolyoma_lg_T_Ce4e2iD2 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
DPolyoma_lg_T_Ce4e2iD1 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
DPolyoma_lg_T_Ce4e2iD3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
HPolyoma_lg_T_Ce4e2iH1 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
HPolyoma_lg_T_Ce4e2iH2 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
HPolyoma_lg_T_Ce4e2iH3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
KPolyoma_lg_T_Ce4e2iK1 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
KPolyoma_lg_T_Ce4e2iK2 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
KPolyoma_lg_T_Ce4e2iK3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
APolyoma_lg_T_Ce4e2iA3 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
APolyoma_lg_T_Ce4e2iA2 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
APolyoma_lg_T_Ce4e2iA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
BPolyoma_lg_T_Ce4e2iB2 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
BPolyoma_lg_T_Ce4e2iB1 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
BPolyoma_lg_T_Ce4e2iB3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
CPolyoma_lg_T_Ce4e2iC1 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
CPolyoma_lg_T_Ce4e2iC3 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
CPolyoma_lg_T_Ce4e2iC2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
EPolyoma_lg_T_Ce4e2iE1 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
EPolyoma_lg_T_Ce4e2iE3 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
EPolyoma_lg_T_Ce4e2iE2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
FPolyoma_lg_T_Ce4e2iF1 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
FPolyoma_lg_T_Ce4e2iF2 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
FPolyoma_lg_T_Ce4e2iF3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
GPolyoma_lg_T_Ce4e2iG2 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
GPolyoma_lg_T_Ce4e2iG3 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
GPolyoma_lg_T_Ce4e2iG1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
IPolyoma_lg_T_Ce4e2iI3 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
IPolyoma_lg_T_Ce4e2iI1 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
IPolyoma_lg_T_Ce4e2iI2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
JPolyoma_lg_T_Ce4e2iJ2 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
JPolyoma_lg_T_Ce4e2iJ1 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
JPolyoma_lg_T_Ce4e2iJ3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
LPolyoma_lg_T_Ce4e2iL1 A: alpha arraysX: N-terminal domain of large tumor antigen (From Topology)H: N-terminal domain of large tumor antigen (From Topology)T: N-terminal domain of large tumor antigenF: Polyoma_lg_T_CECOD (1.6)
LPolyoma_lg_T_Ce4e2iL2 A: alpha complex topologyX: PriB N-terminal domain-like (From Topology)H: PriB N-terminal domain-like (From Topology)T: PriB N-terminal domain-likeF: Polyoma_lg_T_CECOD (1.6)
LPolyoma_lg_T_Ce4e2iL3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Polyoma_lg_T_CECOD (1.6)
O [auth 6]KOG1625_1ste4e2i61 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
Q [auth W]KOG1625_1ste4e2iW1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
T [auth 9]KOG1625_1ste4e2i91 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
U [auth 1]KOG1625_1ste4e2i11 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
W [auth 8]KOG1625_1ste4e2i81 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
M [auth 2]KOG1625_1ste4e2i21 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
N [auth 3]KOG1625_1ste4e2i31 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
P [auth U]KOG1625_1ste4e2iU1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
R [auth 5]KOG1625_1ste4e2i51 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
S [auth 7]KOG1625_1ste4e2i71 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)
V [auth 4]KOG1625_1ste4e2i41 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: KOG1625_1stECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF06431Polyomavirus large T antigen C-terminus (Polyoma_lg_T_C)Polyomavirus large T antigen C-terminus- Family
PF08418DNA polymerase alpha subunit B N-terminal (Pol_alpha_B_N)DNA polymerase alpha subunit B N-terminalThis is the eukaryotic DNA polymerase alpha subunit B N-terminal domain which is involved in complex formation [1,4]. This domain docks on the SV40 helicase and activates the viral primosome [3].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Large T antigen
DNA polymerase alpha subunit B

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001623DnaJ domainDomain
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C, D, E
IPR017910Zinc finger, large T-antigen D1-typeDomain
A, B, C, D, E
IPR003133T antigen, Ori-bindingDomain
A, B, C, D, E
IPR037102Zinc finger, large T-antigen D1 domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR036869Chaperone J-domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR014015Helicase, superfamily 3, DNA virusDomain
A, B, C, D, E
IPR016392Large T antigen, polyomaviridaeFamily
A, B, C, D, E
IPR010932Large T antigen, polyomavirus, C-terminalDomain
IPR043034DNA polymerase alpha, subunit B, N-terminal domain superfamilyHomologous Superfamily
IPR007185DNA polymerase alpha/delta/epsilon, subunit BDomain
IPR054300DNA polymerase alpha subunit B, OB domainDomain
IPR013627DNA polymerase alpha, subunit B, N-terminalDomain
IPR016722DNA polymerase alpha, subunit BFamily