4DWS
Crystal Structure of a chitinase from the Yersinia entomophaga toxin complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e4dwsA1 | A: a+b two layers | X: FKBP-like | H: Chitinase insertion domain (From Topology) | T: Chitinase insertion domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00704 | e4dwsA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00704 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4dwsB1 | A: a+b two layers | X: FKBP-like | H: Chitinase insertion domain (From Topology) | T: Chitinase insertion domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00704 | e4dwsB2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00704 | ECOD (1.6) |
D | F_UNCLASSIFIED | e4dwsD1 | A: a+b two layers | X: FKBP-like | H: Chitinase insertion domain (From Topology) | T: Chitinase insertion domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF00704 | e4dwsD2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00704 | ECOD (1.6) |
C | F_UNCLASSIFIED | e4dwsC1 | A: a+b two layers | X: FKBP-like | H: Chitinase insertion domain (From Topology) | T: Chitinase insertion domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF00704 | e4dwsC2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00704 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.2.0) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
B | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.2.0) |
B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
D | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.2.0) |
D | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
C | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.2.0) |
C | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00704 | Glycosyl hydrolases family 18 (Glyco_hydro_18) | Glycosyl hydrolases family 18 | - | Domain | |
PF00704 | Glycosyl hydrolases family 18 (Glyco_hydro_18) | Glycosyl hydrolases family 18 | - | Domain | |
PF00704 | Glycosyl hydrolases family 18 (Glyco_hydro_18) | Glycosyl hydrolases family 18 | - | Domain | |
PF00704 | Glycosyl hydrolases family 18 (Glyco_hydro_18) | Glycosyl hydrolases family 18 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011583 | Chitinase II | Domain | |
IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain | |
IPR011583 | Chitinase II | Domain | |
IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain | |
IPR011583 | Chitinase II | Domain | |
IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain | |
IPR011583 | Chitinase II | Domain | |
IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
M3L | Parent Component: LYS :  AA0074 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 | |
MLY | Parent Component: LYS :  AA0074 , AA0075 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 | |
MLZ | Parent Component: LYS :  AA0074 , AA0075 , AA0076 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 | |
M3L | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 | |
MLY | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 | |
MLZ | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 | |
M3L | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 | |
MLY | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 , AA0075 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 | |
MLZ | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 | |
M3L | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 | |
MLY | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 , AA0075 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 | |
MLZ | Parent Component: LYS :  AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 , AA0074 , AA0075 , AA0076 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 |