4DVY

Crystal structure of the Helicobacter pylori CagA oncoprotein

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth P]EUF08079e4dvyP1 A: alpha bundlesX: Oncogenic effector CagA N-terminal domain (From Topology)H: Oncogenic effector CagA N-terminal domain (From Topology)T: Oncogenic effector CagA N-terminal domainF: EUF08079ECOD (1.6)
A [auth P]CagA_likee4dvyP3 A: alpha bundlesX: Oncogenic effector CagA domain III (From Topology)H: Oncogenic effector CagA domain III (From Topology)T: Oncogenic effector CagA domain IIIF: CagA_likeECOD (1.6)
A [auth P]EUF08560e4dvyP2 A: a+b complex topologyX: Oncogenic effector CagA meander beta sheet domain (From Topology)H: Oncogenic effector CagA meander beta sheet domain (From Topology)T: Oncogenic effector CagA meander beta sheet domainF: EUF08560ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth P]1.10.357.130 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)
A [auth P]1.20.120.1270 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CagA exotoxin domain IIICATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth P]Cytotoxicity-associated immunodominant antigen - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth P]IPR045157CagA, N-terminalDomain
A [auth P]IPR005169CagA exotoxin, phosphopeptide substrate mimic regionDomain
A [auth P]IPR004355Type IV secretion system CagA exotoxinFamily