4DS7
Crystal structure of yeast calmodulin bound to the C-terminal fragment of spindle pole body protein Spc110
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4ds7a_ | All alpha proteins | EF Hand-like | EF-hand | Calmodulin-like | automated matches | Yeast (Kluyveromyces lactis NRRL Y-1140 ) [TaxId: 284590 ], | SCOPe (2.08) |
B | d4ds7b_ | All alpha proteins | EF Hand-like | EF-hand | Calmodulin-like | automated matches | Yeast (Kluyveromyces lactis NRRL Y-1140 ) [TaxId: 284590 ], | SCOPe (2.08) |
C | d4ds7c_ | All alpha proteins | EF Hand-like | EF-hand | Calmodulin-like | automated matches | Yeast (Kluyveromyces lactis NRRL Y-1140 ) [TaxId: 284590 ], | SCOPe (2.08) |
D | d4ds7d_ | All alpha proteins | EF Hand-like | EF-hand | Calmodulin-like | automated matches | Yeast (Kluyveromyces lactis NRRL Y-1140 ) [TaxId: 284590 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EF-hand_7_8 | e4ds7A2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
A | EF-hand_7_5 | e4ds7A3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
B | EF-hand_7_8 | e4ds7B2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
B | EF-hand_7_5 | e4ds7B1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
C | EF-hand_7_8 | e4ds7C2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
C | EF-hand_7_5 | e4ds7C1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
D | EF-hand_7_8 | e4ds7D2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
D | EF-hand_7_5 | e4ds7D1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
B | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
C | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
D | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
E | 6.10.310.10 | Special | Helix non-globular | Rhopdopsin 7-helix transmembrane proteins | CATH (4.3.0) | |
H | 6.10.310.10 | Special | Helix non-globular | Rhopdopsin 7-helix transmembrane proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00036 | EF hand (EF-hand_1) | EF hand | The EF-hands can be divided into two classes: signalling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typica ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050230 | Calcium-Regulated Muscle Contraction and Cellular Process | Family | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR040593 | Spindle pole body component 110, C-terminal | Domain |