Annotations: 4CLC

Crystal structure of Ybr137w protein

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	Myosin_head	e4clcE1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: PEBP-like	F: Myosin_head	ECOD (v295.2)
D	Myosin_head	e4clcD1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: PEBP-like	F: Myosin_head	ECOD (v295.2)
C	Cas3_HD	e4clcC1	A: alpha arrays	X: thumb domain in bacteriophage RB69-like DNA polymerase I	H: thumb domain in bacteriophage RB69-like DNA polymerase I	T: thumb domain in bacteriophage RB69-like DNA polymerase I	F: Cas3_HD	ECOD (v295.2)
B	Myosin_head	e4clcB1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: PEBP-like	F: Myosin_head	ECOD (v295.2)
A	Myosin_head	e4clcA1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: PEBP-like	F: Myosin_head	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)
D	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)
C	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)
B	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)
A	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E	PF03928	Haem degrading protein HbpS-like (HbpS-like)	Haem degrading protein HbpS-like	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-com ...	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein [2]. The structure of GlcG is composed of an alpha-beta(2)-alpha(3)-beta(2)-alpha fold.	Domain
D	PF03928	Haem degrading protein HbpS-like (HbpS-like)	Haem degrading protein HbpS-like	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-com ...	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein [2]. The structure of GlcG is composed of an alpha-beta(2)-alpha(3)-beta(2)-alpha fold.	Domain
C	PF03928	Haem degrading protein HbpS-like (HbpS-like)	Haem degrading protein HbpS-like	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-com ...	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein [2]. The structure of GlcG is composed of an alpha-beta(2)-alpha(3)-beta(2)-alpha fold.	Domain
B	PF03928	Haem degrading protein HbpS-like (HbpS-like)	Haem degrading protein HbpS-like	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-com ...	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein [2]. The structure of GlcG is composed of an alpha-beta(2)-alpha(3)-beta(2)-alpha fold.	Domain
A	PF03928	Haem degrading protein HbpS-like (HbpS-like)	Haem degrading protein HbpS-like	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-com ...	This entry includes haem degrading protein HbpS from Streptomyces reticuli (swiss:Q9RIM2) and and GlcG from Escherichia coli [1]. HbpS is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein [2]. The structure of GlcG is composed of an alpha-beta(2)-alpha(3)-beta(2)-alpha fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E	UPF0303 PROTEIN YBR137W	-	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting post-translational protein targeting to endoplasmic reticulum membrane localization within membrane establishment of localization protein targeting to membrane localization establishment of protein localization to organelle cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex TRC complex ER membrane insertion complex
D	UPF0303 PROTEIN YBR137W	-	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting post-translational protein targeting to endoplasmic reticulum membrane localization within membrane establishment of localization protein targeting to membrane localization establishment of protein localization to organelle cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex TRC complex ER membrane insertion complex
C	UPF0303 PROTEIN YBR137W	-	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting post-translational protein targeting to endoplasmic reticulum membrane localization within membrane establishment of localization protein targeting to membrane localization establishment of protein localization to organelle cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex TRC complex ER membrane insertion complex
B	UPF0303 PROTEIN YBR137W	-	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting post-translational protein targeting to endoplasmic reticulum membrane localization within membrane establishment of localization protein targeting to membrane localization establishment of protein localization to organelle cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex TRC complex ER membrane insertion complex
A	UPF0303 PROTEIN YBR137W	-	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting post-translational protein targeting to endoplasmic reticulum membrane localization within membrane establishment of localization protein targeting to membrane localization establishment of protein localization to organelle cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex TRC complex ER membrane insertion complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E	IPR010371	YBR137W-like	Family
E	IPR038084	Corrinoid adenosyltransferase PduO/GlcC-like superfamily	Homologous Superfamily
E	IPR005624	Corrinoid adenosyltransferase PduO/GlcC-like	Domain
D	IPR010371	YBR137W-like	Family
D	IPR038084	Corrinoid adenosyltransferase PduO/GlcC-like superfamily	Homologous Superfamily
D	IPR005624	Corrinoid adenosyltransferase PduO/GlcC-like	Domain
C	IPR010371	YBR137W-like	Family
C	IPR038084	Corrinoid adenosyltransferase PduO/GlcC-like superfamily	Homologous Superfamily
C	IPR005624	Corrinoid adenosyltransferase PduO/GlcC-like	Domain
B	IPR010371	YBR137W-like	Family
B	IPR038084	Corrinoid adenosyltransferase PduO/GlcC-like superfamily	Homologous Superfamily
B	IPR005624	Corrinoid adenosyltransferase PduO/GlcC-like	Domain
A	IPR010371	YBR137W-like	Family
A	IPR038084	Corrinoid adenosyltransferase PduO/GlcC-like superfamily	Homologous Superfamily
A	IPR005624	Corrinoid adenosyltransferase PduO/GlcC-like	Domain