4B93
Complex of Vamp7 cytoplasmic domain with 2nd ankyrin repeat domain of Varp
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Longin,Synaptobrevin | e4b93A1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Longin,Synaptobrevin | ECOD (1.6) |
B | Ank_2 | e4b93B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.450.50 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Longin domain | CATH (4.3.0) |
B | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13774 | Regulated-SNARE-like domain (Longin) | Regulated-SNARE-like domain | Longin is one of the approximately 26 components required for transporting proteins from the ER to the plasma membrane, via the Golgi apparatus. It is necessary for the steps of the transfer from the ER to the Golgi complex [1]. Longins are the only ... | Domain | |
PF12796 | Ankyrin repeats (3 copies) (Ank_2) | Ankyrin repeats (3 copies) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001388 | Synaptobrevin-like | Family | |
IPR011012 | Longin-like domain superfamily | Homologous Superfamily | |
IPR010908 | Longin domain | Domain | |
IPR042855 | v-SNARE, coiled-coil homology domain | Domain | |
IPR051097 | Synaptobrevin-like vesicular transport protein | Family | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR003123 | VPS9 domain | Domain | |
IPR002110 | Ankyrin repeat | Repeat | |
IPR051248 | UPF0507/Ankyrin repeat domain-containing protein 27 | Family | |
IPR037191 | VPS9 domain superfamily | Homologous Superfamily |