4B0E
Crystal structure of the Caf1A usher protein N-terminal domain from Yersinia pestis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | d4b0ed_ | All beta proteins | FimD N-terminal domain-like | FimD N-terminal domain-like | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PapC_N | e4b0eA2 | A: beta barrels | X: FimD N-terminal domain-like | H: FimD N-terminal domain-like (From Topology) | T: FimD N-terminal domain-like | F: PapC_N | ECOD (1.6) |
B | PapC_N | e4b0eB3 | A: beta barrels | X: FimD N-terminal domain-like | H: FimD N-terminal domain-like (From Topology) | T: FimD N-terminal domain-like | F: PapC_N | ECOD (1.6) |
C | PapC_N | e4b0eC3 | A: beta barrels | X: FimD N-terminal domain-like | H: FimD N-terminal domain-like (From Topology) | T: FimD N-terminal domain-like | F: PapC_N | ECOD (1.6) |
D | PapC_N | e4b0eD2 | A: beta barrels | X: FimD N-terminal domain-like | H: FimD N-terminal domain-like (From Topology) | T: FimD N-terminal domain-like | F: PapC_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.410 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | PapC, N-terminal domain | CATH (4.3.0) |
B | 3.10.20.410 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | PapC, N-terminal domain | CATH (4.3.0) |
C | 3.10.20.410 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | PapC, N-terminal domain | CATH (4.3.0) |
D | 3.10.20.410 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | PapC, N-terminal domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
F1 CAPSULE-ANCHORING PROTEIN |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042186 | Outer membrane usher protein FimD, plug domain | Homologous Superfamily | |
IPR037224 | PapC, N-terminal domain superfamily | Homologous Superfamily | |
IPR018030 | Fimbrial membrane usher, conserved site | Conserved Site | |
IPR025885 | PapC, N-terminal domain | Domain | |
IPR043142 | PapC-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR025949 | PapC-like, C-terminal domain | Domain | |
IPR000015 | Outer membrane usher protein | Family |