4AVK
Structure of trigonal FimH lectin domain crystal soaked with an alpha- D-mannoside O-linked to propynyl pyridine at 2.4A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4avka_ | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | Bacterial adhesins | Pilus subunits | Mannose-specific adhesin FimH, N-terminal domain | (Escherichia coli UTI89 ) [TaxId: 364106 ], | SCOPe (2.08) |
B | d4avkb_ | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | Bacterial adhesins | Pilus subunits | Mannose-specific adhesin FimH, N-terminal domain | (Escherichia coli UTI89 ) [TaxId: 364106 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FimH_man-bind | e4avkA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: FimH_man-bind | ECOD (1.6) |
B | FimH_man-bind | e4avkB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: FimH_man-bind | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1090 | Mainly Beta | Sandwich | Immunoglobulin-like | Fimbrial-type adhesion domain | CATH (4.3.0) |
B | 2.60.40.1090 | Mainly Beta | Sandwich | Immunoglobulin-like | Fimbrial-type adhesion domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09160 | FimH, mannose binding (FimH_man-bind) | FimH, mannose binding | Members of this family adopt a secondary structure consisting of a beta sandwich, with nine strands arranged in two sheets in a Greek key topology. They are predominantly found in bacterial mannose-specific adhesins, since they are capable of binding ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036937 | Fimbrial-type adhesion domain superfamily | Homologous Superfamily | |
IPR015243 | FimH, mannose-binding domain | Domain | |
IPR050263 | Bacterial Fimbrial Adherence | Family | |
IPR000259 | Fimbrial-type adhesion domain | Domain | |
IPR008966 | Adhesion domain superfamily | Homologous Superfamily |