Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4acaa1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor SelB, domains 2 and 4 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Ad4acaa3 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor SelB, domain 3 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Ad4acaa4 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor SelB, N-terminal domain (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Ad4acaa5 Artifacts Tags Tags Tags N-terminal Tags (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Bd4acab1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor SelB, domains 2 and 4 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Bd4acab3 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor SelB, domain 3 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Bd4acab4 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor SelB, N-terminal domain (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Cd4acac1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor SelB, domains 2 and 4 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Cd4acac3 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor SelB, domain 3 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Cd4acac4 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor SelB, N-terminal domain (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Cd4acac5 Artifacts Tags Tags Tags N-terminal Tags (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Dd4acad1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor SelB, domains 2 and 4 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Dd4acad3 All beta proteins Elongation factor/aminomethyltransferase common domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain Elongation factor SelB, domain 3 (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)
Dd4acad4 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor SelB, N-terminal domain (Methanococcus maripaludis ) [TaxId: 39152 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRas-like P-loop GTPases 8043379 3002022 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyEF-Tu post-G domain-like 8043376 3002024 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyEF-Tu post-G domain-like 8043377 3002024 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyEF-Tu post-G domain-like 8091672 3002024 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEF-Tu post-G domain-like 8043377 3002024 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEF-Tu post-G domain-like 8091672 3002024 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRas-like P-loop GTPases 8043379 3002022 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEF-Tu post-G domain-like 8043376 3002024 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRas-like P-loop GTPases 8043379 3002022 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyEF-Tu post-G domain-like 8043377 3002024 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyEF-Tu post-G domain-like 8043376 3002024 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyEF-Tu post-G domain-like 8091672 3002024 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyEF-Tu post-G domain-like 8091672 3002024 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyEF-Tu post-G domain-like 8043377 3002024 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRas-like P-loop GTPases 8043379 3002022 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyEF-Tu post-G domain-like 8043376 3002024 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AselB_2nd_1e4acaA4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: selB_2nd_1ECOD (1.6)
AGTP_EFTU_D2_1e4acaA9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_1ECOD (1.6)
AeSelB_III_1e4acaA2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: eSelB_III_1ECOD (1.6)
AMnmE_helical_2nde4acaA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
BselB_2nd_1e4acaB4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: selB_2nd_1ECOD (1.6)
BGTP_EFTU_D2_1e4acaB12 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_1ECOD (1.6)
BeSelB_III_1e4acaB2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: eSelB_III_1ECOD (1.6)
BMnmE_helical_2nde4acaB14 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
CselB_2nd_1e4acaC4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: selB_2nd_1ECOD (1.6)
CGTP_EFTU_D2_1e4acaC8 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_1ECOD (1.6)
CeSelB_III_1e4acaC2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: eSelB_III_1ECOD (1.6)
CMnmE_helical_2nde4acaC10 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
DselB_2nd_1e4acaD4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: selB_2nd_1ECOD (1.6)
DGTP_EFTU_D2_1e4acaD8 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_1ECOD (1.6)
DeSelB_III_1e4acaD2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: eSelB_III_1ECOD (1.6)
DMnmE_helical_2nde4acaD10 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
A, B, C, D
PF21440Archaeal selenocysteine-specific elongation factor, domain III (aSelB_III)Archaeal selenocysteine-specific elongation factor, domain IIISelenocysteine-specific elongation factor (SelB) is a transcription factor necessary for the incorporation of selenocysteine into proteins. This entry represents domain III of archaeal SelB, which adopts a beta-barrel fold and is homologous to domain ...Selenocysteine-specific elongation factor (SelB) is a transcription factor necessary for the incorporation of selenocysteine into proteins. This entry represents domain III of archaeal SelB, which adopts a beta-barrel fold and is homologous to domain III of EF-Tu [1].
Domain
A, B, C, D
PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
TRANSLATION ELONGATION FACTOR SELB