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 4A0E | pdb_00004a0e

Crystal structure of the cytoplasmic N-terminal domain of Yersinia pestis YscD

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilySMAD/FHA domain-like 8092644 3000137 SCOP2B (2022-06-29)
ASCOP2 FamilyPrgH-like 8046014 4004224 SCOP2 (2022-06-29)
ASCOP2 SuperfamilySMAD/FHA domain-like 8092644 3000137 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4a0eB2 A: alpha arraysX: DEATH domainH: PH domain-likeT: PH domain-likeF:ECOD (v295.2)
Ae4a0eA2 A: alpha arraysX: DEATH domainH: PH domain-likeT: PH domain-likeF:ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.200.20 Mainly Beta Sandwich Tumour Suppressor Smad4 CATH (4.3.0)
A2.60.200.20 Mainly Beta Sandwich Tumour Suppressor Smad4 CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF16697Inner membrane component of T3SS, cytoplasmic domain (Yop-YscD_cpl)Inner membrane component of T3SS, cytoplasmic domainYop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus [1,2]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR012843YscDFamily
A, B
IPR057770YscD/Y4YQ, C-terminal domainDomain
A, B
IPR032034YscD-like, Bon-like domain 1Domain
A, B
IPR008984SMAD/FHA domain superfamilyHomologous Superfamily
A, B
IPR053946YscD-like, Bon-like domain 3Domain
A, B
IPR032030YscD, cytoplasmic domainDomain
A, B
IPR053947YscD-like, Bon-like domain 2Domain