Cryo-EM reconstruction of native and expanded Turnip Crinkle virus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8071988 | 3000918 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | CNV-CP protruding P-domain-like | 8089977 | 3002408 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | CNV-CP protruding P-domain-like | 8089977 | 3002408 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8071988 | 3000918 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8071988 | 3000918 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | CNV-CP protruding P-domain-like | 8089977 | 3002408 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | RACo_linker | e3zx9A1 | A: a/b three-layered sandwiches | X: Ribosomal protein L31e-like | H: Reductive activator for corrinoid/iron-sulfur protein second domain | T: Reductive activator for corrinoid/iron-sulfur protein second domain | F: RACo_linker | ECOD (v294.1) |
| B | RACo_linker | e3zx9B1 | A: a/b three-layered sandwiches | X: Ribosomal protein L31e-like | H: Reductive activator for corrinoid/iron-sulfur protein second domain | T: Reductive activator for corrinoid/iron-sulfur protein second domain | F: RACo_linker | ECOD (v294.1) |
| C | RACo_linker | e3zx9C1 | A: a/b three-layered sandwiches | X: Ribosomal protein L31e-like | H: Reductive activator for corrinoid/iron-sulfur protein second domain | T: Reductive activator for corrinoid/iron-sulfur protein second domain | F: RACo_linker | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00729 | Viral coat protein (S domain) (Viral_coat) | Viral coat protein (S domain) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
| IPR000937 | Icosahedral viral capsid protein, S domain | Domain |














